Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF566 and GFF567 are separated by 9 nucleotides GFF567 and GFF568 are separated by 18 nucleotides GFF568 and GFF569 overlap by 4 nucleotides
GFF566 - putative chromosome-partitioning protein ParB, at 627,380 to 628,252
GFF566
GFF567 - Chromosome partitioning protein ParA, at 628,262 to 629,059
GFF567
GFF568 - Ribosomal RNA small subunit methyltransferase G, at 629,078 to 629,722
GFF568
GFF569 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 629,719 to 631,617
GFF569
Position (kb) 629
630 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 628.108 kb on - strand, within GFF566 at 628.263 kb on + strand at 628.263 kb on + strand at 628.263 kb on + strand at 628.263 kb on + strand at 628.264 kb on - strand at 628.264 kb on - strand at 628.264 kb on - strand at 628.264 kb on - strand at 628.264 kb on - strand at 628.264 kb on - strand at 628.335 kb on + strand at 628.365 kb on + strand, within GFF567 at 628.386 kb on + strand, within GFF567 at 628.434 kb on + strand, within GFF567 at 628.435 kb on - strand, within GFF567 at 628.503 kb on + strand, within GFF567 at 628.503 kb on + strand, within GFF567 at 628.503 kb on + strand, within GFF567 at 628.504 kb on - strand, within GFF567 at 628.504 kb on - strand, within GFF567 at 628.504 kb on - strand, within GFF567 at 628.504 kb on - strand, within GFF567 at 628.605 kb on + strand, within GFF567 at 628.605 kb on + strand, within GFF567 at 628.605 kb on + strand, within GFF567 at 628.606 kb on - strand, within GFF567 at 628.624 kb on + strand, within GFF567 at 628.624 kb on + strand, within GFF567 at 628.625 kb on - strand, within GFF567 at 628.625 kb on - strand, within GFF567 at 628.698 kb on + strand, within GFF567 at 628.699 kb on - strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.704 kb on + strand, within GFF567 at 628.705 kb on - strand, within GFF567 at 628.705 kb on - strand, within GFF567 at 628.705 kb on - strand, within GFF567 at 628.878 kb on + strand, within GFF567 at 628.878 kb on + strand, within GFF567 at 628.878 kb on + strand, within GFF567 at 628.879 kb on - strand, within GFF567 at 628.879 kb on - strand, within GFF567 at 628.879 kb on - strand, within GFF567 at 628.903 kb on + strand, within GFF567 at 628.915 kb on + strand, within GFF567 at 628.916 kb on - strand, within GFF567 at 629.049 kb on - strand at 629.049 kb on - strand at 629.049 kb on - strand at 629.096 kb on + strand at 629.587 kb on - strand, within GFF568 at 629.587 kb on - strand, within GFF568 at 630.387 kb on - strand, within GFF569 at 630.573 kb on - strand, within GFF569
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 628,108 - GFF566 0.83 +1.0 628,263 + -0.2 628,263 + -0.8 628,263 + -1.0 628,263 + +0.2 628,264 - +0.0 628,264 - -1.6 628,264 - -0.7 628,264 - +1.4 628,264 - -0.2 628,264 - -0.4 628,335 + -1.3 628,365 + GFF567 0.13 -0.7 628,386 + GFF567 0.16 -0.2 628,434 + GFF567 0.22 -0.6 628,435 - GFF567 0.22 -3.8 628,503 + GFF567 0.30 -1.2 628,503 + GFF567 0.30 -1.0 628,503 + GFF567 0.30 -0.8 628,504 - GFF567 0.30 +0.4 628,504 - GFF567 0.30 +2.0 628,504 - GFF567 0.30 -0.9 628,504 - GFF567 0.30 -0.4 628,605 + GFF567 0.43 +0.4 628,605 + GFF567 0.43 -0.7 628,605 + GFF567 0.43 -2.1 628,606 - GFF567 0.43 -0.3 628,624 + GFF567 0.45 -2.2 628,624 + GFF567 0.45 +0.5 628,625 - GFF567 0.45 -0.8 628,625 - GFF567 0.45 +0.0 628,698 + GFF567 0.55 +0.2 628,699 - GFF567 0.55 -0.8 628,704 + GFF567 0.55 +0.2 628,704 + GFF567 0.55 -2.2 628,704 + GFF567 0.55 -0.8 628,704 + GFF567 0.55 -0.3 628,704 + GFF567 0.55 +0.1 628,704 + GFF567 0.55 +1.0 628,705 - GFF567 0.56 -0.3 628,705 - GFF567 0.56 +1.0 628,705 - GFF567 0.56 -0.3 628,878 + GFF567 0.77 +0.6 628,878 + GFF567 0.77 +1.4 628,878 + GFF567 0.77 -0.2 628,879 - GFF567 0.77 -0.5 628,879 - GFF567 0.77 -1.0 628,879 - GFF567 0.77 -0.3 628,903 + GFF567 0.80 +0.0 628,915 + GFF567 0.82 -0.8 628,916 - GFF567 0.82 -0.9 629,049 - +0.7 629,049 - -0.8 629,049 - -0.5 629,096 + -0.2 629,587 - GFF568 0.79 -1.8 629,587 - GFF568 0.79 -0.6 630,387 - GFF569 0.35 -0.5 630,573 - GFF569 0.45 -0.2
Or see this region's nucleotide sequence