Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF506 and GFF507 are separated by 11 nucleotides GFF507 and GFF508 are separated by 163 nucleotides
GFF506 - Oxaloacetate decarboxylase alpha chain, at 560,039 to 561,847
GFF506
GFF507 - 2-oxoglutarate carboxylase small subunit, at 561,859 to 563,301
GFF507
GFF508 - HTH-type transcriptional activator CmpR, at 563,465 to 564,427
GFF508
Position (kb) 561
562
563
564 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 561.015 kb on + strand, within GFF506 at 561.015 kb on + strand, within GFF506 at 561.015 kb on + strand, within GFF506 at 561.015 kb on + strand, within GFF506 at 561.016 kb on - strand, within GFF506 at 561.033 kb on + strand, within GFF506 at 561.033 kb on + strand, within GFF506 at 561.033 kb on + strand, within GFF506 at 561.033 kb on + strand, within GFF506 at 561.034 kb on - strand, within GFF506 at 561.034 kb on - strand, within GFF506 at 561.034 kb on - strand, within GFF506 at 561.039 kb on + strand, within GFF506 at 561.039 kb on + strand, within GFF506 at 561.039 kb on + strand, within GFF506 at 561.040 kb on - strand, within GFF506 at 561.040 kb on - strand, within GFF506 at 561.040 kb on - strand, within GFF506 at 561.040 kb on - strand, within GFF506 at 561.040 kb on - strand, within GFF506 at 561.084 kb on + strand, within GFF506 at 561.297 kb on + strand, within GFF506 at 561.298 kb on - strand, within GFF506 at 561.409 kb on + strand, within GFF506 at 561.409 kb on + strand, within GFF506 at 561.410 kb on - strand, within GFF506 at 561.410 kb on - strand, within GFF506 at 561.410 kb on - strand, within GFF506 at 561.411 kb on + strand, within GFF506 at 561.411 kb on + strand, within GFF506 at 561.412 kb on - strand, within GFF506 at 561.412 kb on - strand, within GFF506 at 561.412 kb on - strand, within GFF506 at 561.726 kb on + strand at 561.827 kb on + strand at 561.853 kb on + strand at 561.853 kb on + strand at 561.853 kb on + strand at 561.932 kb on + strand at 561.932 kb on + strand at 561.932 kb on + strand at 561.933 kb on - strand at 561.933 kb on - strand at 561.933 kb on - strand at 561.933 kb on - strand at 561.933 kb on - strand at 562.017 kb on - strand, within GFF507 at 562.020 kb on - strand, within GFF507 at 562.020 kb on - strand, within GFF507 at 562.020 kb on - strand, within GFF507 at 562.164 kb on - strand, within GFF507 at 562.164 kb on - strand, within GFF507 at 562.205 kb on + strand, within GFF507 at 562.205 kb on + strand, within GFF507 at 562.206 kb on - strand, within GFF507 at 562.208 kb on + strand, within GFF507 at 562.209 kb on - strand, within GFF507 at 562.427 kb on + strand, within GFF507 at 562.427 kb on + strand, within GFF507 at 562.428 kb on - strand, within GFF507 at 562.428 kb on - strand, within GFF507 at 562.517 kb on + strand, within GFF507 at 562.518 kb on - strand, within GFF507 at 562.518 kb on - strand, within GFF507 at 563.099 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.149 kb on + strand, within GFF507 at 563.150 kb on - strand, within GFF507 at 563.150 kb on - strand, within GFF507 at 563.150 kb on - strand, within GFF507 at 563.150 kb on - strand, within GFF507 at 563.150 kb on - strand, within GFF507 at 563.221 kb on + strand at 563.222 kb on - strand at 563.222 kb on - strand at 563.222 kb on - strand at 563.222 kb on - strand at 563.270 kb on - strand at 563.365 kb on + strand at 563.470 kb on + strand at 563.486 kb on - strand at 563.538 kb on - strand at 563.586 kb on + strand, within GFF508 at 563.587 kb on - strand, within GFF508 at 563.633 kb on + strand, within GFF508 at 563.633 kb on + strand, within GFF508 at 563.634 kb on - strand, within GFF508 at 563.652 kb on - strand, within GFF508 at 563.792 kb on + strand, within GFF508 at 563.792 kb on + strand, within GFF508 at 563.793 kb on - strand, within GFF508 at 563.793 kb on - strand, within GFF508 at 563.793 kb on - strand, within GFF508 at 564.047 kb on + strand, within GFF508 at 564.047 kb on + strand, within GFF508 at 564.049 kb on + strand, within GFF508 at 564.049 kb on + strand, within GFF508 at 564.049 kb on + strand, within GFF508 at 564.050 kb on - strand, within GFF508 at 564.050 kb on - strand, within GFF508 at 564.050 kb on - strand, within GFF508 at 564.050 kb on - strand, within GFF508 at 564.101 kb on + strand, within GFF508 at 564.102 kb on - strand, within GFF508 at 564.102 kb on - strand, within GFF508 at 564.102 kb on - strand, within GFF508 at 564.144 kb on + strand, within GFF508 at 564.144 kb on + strand, within GFF508 at 564.145 kb on - strand, within GFF508 at 564.145 kb on - strand, within GFF508 at 564.145 kb on - strand, within GFF508 at 564.145 kb on - strand, within GFF508
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 561,015 + GFF506 0.54 -3.8 561,015 + GFF506 0.54 -2.6 561,015 + GFF506 0.54 -2.6 561,015 + GFF506 0.54 -0.8 561,016 - GFF506 0.54 -3.8 561,033 + GFF506 0.55 -3.0 561,033 + GFF506 0.55 -0.2 561,033 + GFF506 0.55 -1.7 561,033 + GFF506 0.55 -0.2 561,034 - GFF506 0.55 -1.4 561,034 - GFF506 0.55 -1.8 561,034 - GFF506 0.55 -2.8 561,039 + GFF506 0.55 -2.9 561,039 + GFF506 0.55 -1.5 561,039 + GFF506 0.55 -1.2 561,040 - GFF506 0.55 -3.1 561,040 - GFF506 0.55 -1.2 561,040 - GFF506 0.55 -2.9 561,040 - GFF506 0.55 -3.0 561,040 - GFF506 0.55 -2.8 561,084 + GFF506 0.58 -1.3 561,297 + GFF506 0.70 -2.3 561,298 - GFF506 0.70 -2.5 561,409 + GFF506 0.76 -1.5 561,409 + GFF506 0.76 -2.2 561,410 - GFF506 0.76 -1.5 561,410 - GFF506 0.76 -3.0 561,410 - GFF506 0.76 -2.7 561,411 + GFF506 0.76 -2.4 561,411 + GFF506 0.76 -1.3 561,412 - GFF506 0.76 -0.9 561,412 - GFF506 0.76 -2.8 561,412 - GFF506 0.76 -3.5 561,726 + -2.6 561,827 + -1.5 561,853 + -2.4 561,853 + -2.1 561,853 + -0.5 561,932 + -3.4 561,932 + -2.8 561,932 + -4.1 561,933 - -2.0 561,933 - -3.8 561,933 - -1.6 561,933 - -1.9 561,933 - -0.7 562,017 - GFF507 0.11 -1.6 562,020 - GFF507 0.11 -2.1 562,020 - GFF507 0.11 -2.7 562,020 - GFF507 0.11 -3.0 562,164 - GFF507 0.21 -0.2 562,164 - GFF507 0.21 -1.2 562,205 + GFF507 0.24 -2.5 562,205 + GFF507 0.24 -3.0 562,206 - GFF507 0.24 -2.8 562,208 + GFF507 0.24 -3.1 562,209 - GFF507 0.24 -3.3 562,427 + GFF507 0.39 -2.2 562,427 + GFF507 0.39 -2.6 562,428 - GFF507 0.39 -0.8 562,428 - GFF507 0.39 -2.4 562,517 + GFF507 0.46 -2.4 562,518 - GFF507 0.46 -3.8 562,518 - GFF507 0.46 -2.8 563,099 + GFF507 0.86 -2.2 563,149 + GFF507 0.89 -0.5 563,149 + GFF507 0.89 -2.6 563,149 + GFF507 0.89 -3.4 563,149 + GFF507 0.89 -3.9 563,149 + GFF507 0.89 -1.8 563,149 + GFF507 0.89 -1.2 563,149 + GFF507 0.89 -2.2 563,150 - GFF507 0.89 -1.8 563,150 - GFF507 0.89 -3.4 563,150 - GFF507 0.89 -3.1 563,150 - GFF507 0.89 -3.2 563,150 - GFF507 0.89 -2.3 563,221 + -1.8 563,222 - -2.5 563,222 - -2.0 563,222 - -1.5 563,222 - -2.8 563,270 - -3.0 563,365 + -0.2 563,470 + -1.5 563,486 - -3.8 563,538 - -0.3 563,586 + GFF508 0.13 -1.4 563,587 - GFF508 0.13 -2.3 563,633 + GFF508 0.17 -2.5 563,633 + GFF508 0.17 -1.9 563,634 - GFF508 0.18 -3.7 563,652 - GFF508 0.19 -2.6 563,792 + GFF508 0.34 -2.3 563,792 + GFF508 0.34 -2.6 563,793 - GFF508 0.34 -4.1 563,793 - GFF508 0.34 -1.9 563,793 - GFF508 0.34 -3.0 564,047 + GFF508 0.60 -1.9 564,047 + GFF508 0.60 -2.4 564,049 + GFF508 0.61 -2.2 564,049 + GFF508 0.61 -2.3 564,049 + GFF508 0.61 -1.6 564,050 - GFF508 0.61 -2.6 564,050 - GFF508 0.61 -2.8 564,050 - GFF508 0.61 -2.5 564,050 - GFF508 0.61 -2.5 564,101 + GFF508 0.66 -3.2 564,102 - GFF508 0.66 -2.3 564,102 - GFF508 0.66 -2.0 564,102 - GFF508 0.66 -4.0 564,144 + GFF508 0.71 -2.8 564,144 + GFF508 0.71 -1.3 564,145 - GFF508 0.71 -1.3 564,145 - GFF508 0.71 -3.3 564,145 - GFF508 0.71 -3.3 564,145 - GFF508 0.71 -1.0
Or see this region's nucleotide sequence