Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4819 and GFF4820 overlap by 1 nucleotides GFF4820 and GFF4821 are separated by 169 nucleotides
GFF4819 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 84,036 to 85,412
GFF4819
GFF4820 - Cysteine synthase B, at 85,412 to 86,353
GFF4820
GFF4821 - Sensor protein PfeS, at 86,523 to 87,947
GFF4821
Position (kb) 85
86
87 Strain fitness (log2 ratio) -2
-1
0
1 at 84.757 kb on - strand, within GFF4819 at 84.864 kb on + strand, within GFF4819 at 84.865 kb on - strand, within GFF4819 at 84.865 kb on - strand, within GFF4819 at 85.446 kb on + strand at 85.446 kb on + strand at 85.641 kb on + strand, within GFF4820 at 85.657 kb on - strand, within GFF4820 at 85.851 kb on + strand, within GFF4820 at 85.851 kb on + strand, within GFF4820 at 85.851 kb on + strand, within GFF4820 at 85.851 kb on + strand, within GFF4820 at 85.852 kb on - strand, within GFF4820 at 85.852 kb on - strand, within GFF4820 at 85.919 kb on - strand, within GFF4820 at 85.987 kb on - strand, within GFF4820 at 86.049 kb on + strand, within GFF4820 at 86.117 kb on - strand, within GFF4820 at 86.302 kb on - strand at 86.319 kb on + strand at 86.320 kb on - strand at 86.348 kb on + strand at 86.348 kb on + strand at 86.349 kb on - strand at 86.353 kb on + strand at 86.377 kb on - strand at 86.404 kb on + strand at 86.446 kb on + strand at 86.446 kb on + strand at 86.446 kb on + strand at 86.446 kb on + strand at 86.446 kb on + strand at 86.447 kb on - strand at 86.447 kb on - strand at 86.447 kb on - strand at 86.821 kb on + strand, within GFF4821 at 86.918 kb on + strand, within GFF4821 at 86.919 kb on - strand, within GFF4821 at 87.144 kb on + strand, within GFF4821 at 87.145 kb on - strand, within GFF4821 at 87.228 kb on + strand, within GFF4821 at 87.229 kb on - strand, within GFF4821
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 84,757 - GFF4819 0.52 +1.0 84,864 + GFF4819 0.60 -0.9 84,865 - GFF4819 0.60 -0.0 84,865 - GFF4819 0.60 -1.3 85,446 + -1.7 85,446 + -0.8 85,641 + GFF4820 0.24 -1.7 85,657 - GFF4820 0.26 -1.1 85,851 + GFF4820 0.47 -2.4 85,851 + GFF4820 0.47 -2.1 85,851 + GFF4820 0.47 -1.8 85,851 + GFF4820 0.47 -2.7 85,852 - GFF4820 0.47 -1.3 85,852 - GFF4820 0.47 -1.9 85,919 - GFF4820 0.54 -0.9 85,987 - GFF4820 0.61 -2.4 86,049 + GFF4820 0.68 -2.4 86,117 - GFF4820 0.75 -2.4 86,302 - -0.7 86,319 + -2.4 86,320 - -1.7 86,348 + -1.8 86,348 + +0.2 86,349 - -0.8 86,353 + -1.0 86,377 - +0.3 86,404 + +0.2 86,446 + +0.2 86,446 + -0.7 86,446 + +0.5 86,446 + +0.6 86,446 + +1.1 86,447 - -0.9 86,447 - -1.0 86,447 - -0.7 86,821 + GFF4821 0.21 -0.3 86,918 + GFF4821 0.28 -0.6 86,919 - GFF4821 0.28 +1.3 87,144 + GFF4821 0.44 +0.3 87,145 - GFF4821 0.44 -2.7 87,228 + GFF4821 0.49 -0.2 87,229 - GFF4821 0.50 +0.4
Or see this region's nucleotide sequence