Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4615 and GFF4616 are separated by 2 nucleotides GFF4616 and GFF4617 are separated by 9 nucleotides GFF4617 and GFF4618 are separated by 113 nucleotides GFF4618 and GFF4619 are separated by 97 nucleotides
GFF4615 - hypothetical protein, at 101,700 to 102,116
GFF4615
GFF4616 - hypothetical protein, at 102,119 to 102,601
GFF4616
GFF4617 - HTH-type transcriptional regulator CysB, at 102,611 to 103,585
GFF4617
GFF4618 - hypothetical protein, at 103,699 to 104,202
GFF4618
GFF4619 - hypothetical protein, at 104,300 to 105,205
GFF4619
Position (kb) 102
103
104 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 101.613 kb on + strand at 101.614 kb on - strand at 101.614 kb on - strand at 101.834 kb on + strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.835 kb on - strand, within GFF4615 at 101.955 kb on + strand, within GFF4615 at 101.955 kb on + strand, within GFF4615 at 102.245 kb on + strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.246 kb on - strand, within GFF4616 at 102.272 kb on + strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.273 kb on - strand, within GFF4616 at 102.353 kb on + strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.354 kb on - strand, within GFF4616 at 102.612 kb on + strand at 102.613 kb on - strand at 102.812 kb on + strand, within GFF4617 at 102.812 kb on + strand, within GFF4617 at 102.813 kb on - strand, within GFF4617 at 102.813 kb on - strand, within GFF4617 at 102.853 kb on + strand, within GFF4617 at 102.866 kb on + strand, within GFF4617 at 102.888 kb on + strand, within GFF4617 at 102.889 kb on - strand, within GFF4617 at 102.889 kb on - strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.996 kb on + strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 102.997 kb on - strand, within GFF4617 at 103.000 kb on + strand, within GFF4617 at 103.000 kb on + strand, within GFF4617 at 103.001 kb on - strand, within GFF4617 at 103.001 kb on - strand, within GFF4617 at 103.001 kb on - strand, within GFF4617 at 103.483 kb on + strand, within GFF4617 at 103.484 kb on - strand, within GFF4617 at 103.484 kb on - strand, within GFF4617 at 103.484 kb on - strand, within GFF4617 at 103.484 kb on - strand, within GFF4617 at 103.506 kb on + strand at 103.506 kb on + strand at 103.506 kb on + strand at 103.506 kb on + strand at 103.506 kb on + strand at 103.506 kb on + strand at 103.507 kb on - strand at 103.563 kb on + strand at 103.563 kb on + strand at 103.563 kb on + strand at 103.585 kb on + strand at 103.585 kb on + strand at 103.585 kb on + strand at 103.586 kb on - strand at 103.586 kb on - strand at 103.586 kb on - strand at 103.586 kb on - strand at 103.605 kb on + strand at 103.605 kb on + strand at 103.631 kb on - strand at 103.632 kb on + strand at 103.634 kb on + strand at 103.634 kb on + strand at 103.634 kb on + strand at 103.635 kb on - strand at 103.635 kb on - strand at 103.635 kb on - strand at 103.640 kb on + strand at 103.689 kb on + strand at 103.690 kb on - strand at 103.742 kb on + strand at 103.743 kb on - strand at 103.984 kb on - strand, within GFF4618 at 104.045 kb on + strand, within GFF4618 at 104.046 kb on - strand, within GFF4618 at 104.046 kb on - strand, within GFF4618 at 104.046 kb on - strand, within GFF4618 at 104.095 kb on + strand, within GFF4618 at 104.095 kb on + strand, within GFF4618 at 104.096 kb on - strand, within GFF4618 at 104.096 kb on - strand, within GFF4618 at 104.096 kb on - strand, within GFF4618 at 104.096 kb on - strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.098 kb on + strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.099 kb on - strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.102 kb on + strand, within GFF4618 at 104.103 kb on - strand, within GFF4618 at 104.103 kb on - strand, within GFF4618 at 104.103 kb on - strand, within GFF4618 at 104.103 kb on - strand, within GFF4618 at 104.162 kb on + strand at 104.162 kb on + strand at 104.162 kb on + strand at 104.183 kb on + strand at 104.183 kb on + strand at 104.183 kb on + strand at 104.183 kb on + strand at 104.184 kb on - strand at 104.184 kb on - strand at 104.184 kb on - strand at 104.246 kb on + strand at 104.246 kb on + strand at 104.246 kb on + strand at 104.247 kb on - strand at 104.247 kb on - strand at 104.247 kb on - strand at 104.265 kb on - strand at 104.302 kb on - strand at 104.302 kb on - strand at 104.470 kb on + strand, within GFF4619 at 104.471 kb on - strand, within GFF4619 at 104.471 kb on - strand, within GFF4619
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 101,613 + -0.8 101,614 - -0.1 101,614 - +0.3 101,834 + GFF4615 0.32 -0.0 101,835 - GFF4615 0.32 -0.3 101,835 - GFF4615 0.32 -0.4 101,835 - GFF4615 0.32 +0.8 101,955 + GFF4615 0.61 -1.1 101,955 + GFF4615 0.61 +0.1 102,245 + GFF4616 0.26 +0.2 102,246 - GFF4616 0.26 -1.1 102,246 - GFF4616 0.26 -1.4 102,246 - GFF4616 0.26 -0.7 102,272 + GFF4616 0.32 -0.1 102,273 - GFF4616 0.32 +1.7 102,273 - GFF4616 0.32 -1.2 102,273 - GFF4616 0.32 +0.7 102,353 + GFF4616 0.48 -1.6 102,354 - GFF4616 0.49 -0.3 102,354 - GFF4616 0.49 -0.4 102,354 - GFF4616 0.49 -0.6 102,354 - GFF4616 0.49 -0.4 102,612 + +1.0 102,613 - -0.6 102,812 + GFF4617 0.21 -4.2 102,812 + GFF4617 0.21 -2.2 102,813 - GFF4617 0.21 -0.5 102,813 - GFF4617 0.21 -0.8 102,853 + GFF4617 0.25 -0.6 102,866 + GFF4617 0.26 -1.5 102,888 + GFF4617 0.28 -0.3 102,889 - GFF4617 0.29 +1.7 102,889 - GFF4617 0.29 -0.6 102,996 + GFF4617 0.39 -1.8 102,996 + GFF4617 0.39 -2.8 102,996 + GFF4617 0.39 +0.7 102,996 + GFF4617 0.39 -1.3 102,996 + GFF4617 0.39 +0.0 102,996 + GFF4617 0.39 -1.0 102,997 - GFF4617 0.40 -1.7 102,997 - GFF4617 0.40 -1.9 102,997 - GFF4617 0.40 -2.7 102,997 - GFF4617 0.40 -2.0 102,997 - GFF4617 0.40 -1.2 102,997 - GFF4617 0.40 -1.2 102,997 - GFF4617 0.40 -0.7 102,997 - GFF4617 0.40 -0.8 103,000 + GFF4617 0.40 -2.9 103,000 + GFF4617 0.40 +0.4 103,001 - GFF4617 0.40 -0.1 103,001 - GFF4617 0.40 -2.8 103,001 - GFF4617 0.40 -2.0 103,483 + GFF4617 0.89 -1.6 103,484 - GFF4617 0.90 -1.7 103,484 - GFF4617 0.90 -1.4 103,484 - GFF4617 0.90 -2.4 103,484 - GFF4617 0.90 -1.5 103,506 + -2.2 103,506 + -0.3 103,506 + -0.8 103,506 + -2.3 103,506 + -0.7 103,506 + -1.6 103,507 - -0.3 103,563 + -1.5 103,563 + -2.3 103,563 + -0.8 103,585 + -2.3 103,585 + -1.5 103,585 + -0.3 103,586 - -0.3 103,586 - -2.0 103,586 - -0.5 103,586 - -1.4 103,605 + -0.7 103,605 + +1.4 103,631 - +0.3 103,632 + +0.6 103,634 + -0.3 103,634 + +1.3 103,634 + +0.7 103,635 - -0.7 103,635 - +0.7 103,635 - +0.6 103,640 + +0.5 103,689 + +0.2 103,690 - +0.3 103,742 + +0.3 103,743 - +0.0 103,984 - GFF4618 0.57 -0.1 104,045 + GFF4618 0.69 +0.5 104,046 - GFF4618 0.69 -0.1 104,046 - GFF4618 0.69 +0.6 104,046 - GFF4618 0.69 -0.0 104,095 + GFF4618 0.79 +0.6 104,095 + GFF4618 0.79 -0.3 104,096 - GFF4618 0.79 -0.8 104,096 - GFF4618 0.79 -0.4 104,096 - GFF4618 0.79 -0.1 104,096 - GFF4618 0.79 -0.8 104,098 + GFF4618 0.79 -0.5 104,098 + GFF4618 0.79 -0.2 104,098 + GFF4618 0.79 -1.2 104,098 + GFF4618 0.79 -1.2 104,098 + GFF4618 0.79 -0.4 104,098 + GFF4618 0.79 -0.3 104,098 + GFF4618 0.79 -0.1 104,099 - GFF4618 0.79 +0.8 104,099 - GFF4618 0.79 -0.6 104,099 - GFF4618 0.79 -0.4 104,099 - GFF4618 0.79 -0.4 104,099 - GFF4618 0.79 -2.0 104,099 - GFF4618 0.79 -0.1 104,099 - GFF4618 0.79 -0.6 104,099 - GFF4618 0.79 -1.2 104,099 - GFF4618 0.79 -0.1 104,102 + GFF4618 0.80 -0.7 104,102 + GFF4618 0.80 +0.3 104,102 + GFF4618 0.80 +0.4 104,102 + GFF4618 0.80 -0.3 104,102 + GFF4618 0.80 -0.6 104,102 + GFF4618 0.80 +0.3 104,102 + GFF4618 0.80 +0.0 104,103 - GFF4618 0.80 +0.6 104,103 - GFF4618 0.80 -0.1 104,103 - GFF4618 0.80 -0.3 104,103 - GFF4618 0.80 +0.0 104,162 + +1.5 104,162 + +0.5 104,162 + +1.1 104,183 + +0.5 104,183 + +0.3 104,183 + +0.7 104,183 + +0.3 104,184 - +0.2 104,184 - +0.1 104,184 - -1.5 104,246 + +0.5 104,246 + -1.4 104,246 + +0.9 104,247 - -0.1 104,247 - -1.1 104,247 - +0.1 104,265 - -0.2 104,302 - +0.3 104,302 - -0.8 104,470 + GFF4619 0.19 +0.4 104,471 - GFF4619 0.19 +0.5 104,471 - GFF4619 0.19 +2.0
Or see this region's nucleotide sequence