Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3903 and GFF3904 are separated by 15 nucleotides GFF3904 and GFF3905 are separated by 18 nucleotides
GFF3903 - Glutamate-1-semialdehyde 2,1-aminomutase, at 155,612 to 156,895
GFF3903
GFF3904 - Thiamine-phosphate synthase, at 156,911 to 157,534
GFF3904
GFF3905 - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 157,553 to 158,350
GFF3905
Position (kb) 156
157
158 Strain fitness (log2 ratio) -2
-1
0
1
2 at 157.167 kb on + strand, within GFF3904 at 157.167 kb on + strand, within GFF3904 at 157.168 kb on - strand, within GFF3904 at 157.357 kb on - strand, within GFF3904 at 157.429 kb on - strand, within GFF3904 at 157.471 kb on - strand, within GFF3904 at 157.471 kb on - strand, within GFF3904 at 157.516 kb on - strand at 157.516 kb on - strand at 157.554 kb on + strand at 157.554 kb on + strand at 157.555 kb on - strand at 157.638 kb on + strand, within GFF3905 at 157.639 kb on - strand, within GFF3905 at 157.639 kb on - strand, within GFF3905 at 157.731 kb on + strand, within GFF3905 at 157.731 kb on + strand, within GFF3905 at 157.732 kb on - strand, within GFF3905 at 157.756 kb on + strand, within GFF3905 at 157.756 kb on + strand, within GFF3905 at 157.757 kb on - strand, within GFF3905 at 157.757 kb on - strand, within GFF3905 at 157.785 kb on + strand, within GFF3905 at 157.785 kb on + strand, within GFF3905 at 158.160 kb on - strand, within GFF3905 at 158.341 kb on - strand at 158.344 kb on + strand at 158.344 kb on + strand at 158.363 kb on + strand at 158.363 kb on + strand at 158.392 kb on - strand at 158.437 kb on + strand at 158.438 kb on - strand at 158.467 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 157,167 + GFF3904 0.41 -0.2 157,167 + GFF3904 0.41 -0.2 157,168 - GFF3904 0.41 -1.7 157,357 - GFF3904 0.71 +0.8 157,429 - GFF3904 0.83 -0.4 157,471 - GFF3904 0.90 -1.6 157,471 - GFF3904 0.90 -0.2 157,516 - -1.0 157,516 - +0.3 157,554 + -1.3 157,554 + +0.4 157,555 - +2.6 157,638 + GFF3905 0.11 -0.8 157,639 - GFF3905 0.11 +1.2 157,639 - GFF3905 0.11 +0.1 157,731 + GFF3905 0.22 -1.6 157,731 + GFF3905 0.22 -0.5 157,732 - GFF3905 0.22 -0.1 157,756 + GFF3905 0.25 -0.4 157,756 + GFF3905 0.25 -1.3 157,757 - GFF3905 0.26 -0.3 157,757 - GFF3905 0.26 +1.1 157,785 + GFF3905 0.29 -1.1 157,785 + GFF3905 0.29 +0.4 158,160 - GFF3905 0.76 +0.4 158,341 - +1.0 158,344 + +1.4 158,344 + -0.2 158,363 + -0.7 158,363 + -1.9 158,392 - +0.2 158,437 + -1.5 158,438 - +0.4 158,467 + +0.4
Or see this region's nucleotide sequence