Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3529 and GFF3530 overlap by 4 nucleotides GFF3530 and GFF3531 are separated by 17 nucleotides GFF3531 and GFF3532 are separated by 18 nucleotides
GFF3529 - Chaperone SurA, at 114,531 to 115,478
GFF3529
GFF3530 - hypothetical protein, at 115,475 to 115,945
GFF3530
GFF3531 - hypothetical protein, at 115,963 to 116,592
GFF3531
GFF3532 - hypothetical protein, at 116,611 to 118,308
GFF3532
Position (kb) 115
116 Strain fitness (log2 ratio) -2
-1
0
1 at 114.792 kb on + strand, within GFF3529 at 114.831 kb on - strand, within GFF3529 at 114.869 kb on - strand, within GFF3529 at 114.869 kb on - strand, within GFF3529 at 114.956 kb on + strand, within GFF3529 at 114.956 kb on + strand, within GFF3529 at 114.956 kb on + strand, within GFF3529 at 114.957 kb on - strand, within GFF3529 at 115.037 kb on - strand, within GFF3529 at 115.099 kb on + strand, within GFF3529 at 115.099 kb on + strand, within GFF3529 at 115.554 kb on + strand, within GFF3530 at 115.555 kb on - strand, within GFF3530 at 115.961 kb on + strand at 116.006 kb on + strand at 116.007 kb on - strand at 116.007 kb on - strand at 116.258 kb on + strand, within GFF3531 at 116.592 kb on + strand at 116.593 kb on - strand at 116.593 kb on - strand at 116.593 kb on - strand at 116.612 kb on + strand at 116.816 kb on + strand, within GFF3532 at 116.816 kb on + strand, within GFF3532 at 116.816 kb on + strand, within GFF3532 at 116.817 kb on - strand, within GFF3532 at 116.817 kb on - strand, within GFF3532 at 116.822 kb on + strand, within GFF3532
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 114,792 + GFF3529 0.28 -0.2 114,831 - GFF3529 0.32 -0.3 114,869 - GFF3529 0.36 -0.4 114,869 - GFF3529 0.36 -0.7 114,956 + GFF3529 0.45 +0.4 114,956 + GFF3529 0.45 -0.0 114,956 + GFF3529 0.45 +0.1 114,957 - GFF3529 0.45 +0.3 115,037 - GFF3529 0.53 -1.0 115,099 + GFF3529 0.60 -0.3 115,099 + GFF3529 0.60 +0.3 115,554 + GFF3530 0.17 -2.1 115,555 - GFF3530 0.17 -0.9 115,961 + -0.7 116,006 + +0.9 116,007 - -0.8 116,007 - +1.0 116,258 + GFF3531 0.47 -2.7 116,592 + -0.5 116,593 - -0.4 116,593 - -0.7 116,593 - -0.4 116,612 + -0.0 116,816 + GFF3532 0.12 +0.5 116,816 + GFF3532 0.12 +0.5 116,816 + GFF3532 0.12 +0.3 116,817 - GFF3532 0.12 +0.8 116,817 - GFF3532 0.12 -0.3 116,822 + GFF3532 0.12 -0.0
Or see this region's nucleotide sequence