Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF332 and GFF333 overlap by 4 nucleotides GFF333 and GFF334 overlap by 14 nucleotides
GFF332 - L-cystine transport system permease protein YecS, at 369,256 to 369,924
GFF332
GFF333 - L-cystine transport system permease protein YecS, at 369,921 to 370,571
GFF333
GFF334 - Glutamine transport ATP-binding protein GlnQ, at 370,558 to 371,295
GFF334
Position (kb) 369
370 Strain fitness (log2 ratio) -2
-1
0
1
2 at 368.334 kb on + strand at 368.334 kb on + strand at 368.800 kb on + strand at 368.801 kb on - strand at 368.812 kb on + strand at 368.813 kb on - strand at 368.983 kb on + strand at 368.984 kb on - strand at 369.100 kb on + strand at 369.262 kb on + strand at 369.262 kb on + strand at 369.263 kb on - strand at 369.263 kb on - strand at 369.565 kb on + strand, within GFF332 at 369.826 kb on + strand, within GFF332 at 369.827 kb on - strand, within GFF332 at 369.827 kb on - strand, within GFF332 at 369.847 kb on + strand, within GFF332 at 369.847 kb on + strand, within GFF332 at 369.847 kb on + strand, within GFF332 at 369.848 kb on - strand, within GFF332 at 369.848 kb on - strand, within GFF332 at 369.848 kb on - strand, within GFF332 at 369.995 kb on - strand, within GFF333 at 370.132 kb on + strand, within GFF333 at 370.132 kb on + strand, within GFF333 at 370.133 kb on - strand, within GFF333 at 370.133 kb on - strand, within GFF333 at 370.218 kb on + strand, within GFF333 at 370.219 kb on - strand, within GFF333 at 370.219 kb on - strand, within GFF333 at 370.219 kb on - strand, within GFF333 at 370.500 kb on + strand, within GFF333 at 370.500 kb on + strand, within GFF333 at 370.516 kb on - strand at 370.539 kb on + strand at 370.569 kb on + strand at 370.569 kb on + strand at 370.587 kb on + strand at 370.587 kb on + strand at 370.587 kb on + strand at 370.588 kb on - strand at 370.591 kb on + strand at 370.591 kb on + strand at 370.592 kb on - strand at 370.592 kb on - strand at 370.592 kb on - strand at 370.592 kb on - strand at 370.610 kb on + strand at 370.610 kb on + strand at 370.611 kb on - strand at 370.611 kb on - strand at 370.753 kb on + strand, within GFF334 at 370.753 kb on + strand, within GFF334 at 370.886 kb on + strand, within GFF334
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 368,334 + +0.9 368,334 + +0.1 368,800 + -0.2 368,801 - +0.2 368,812 + -0.2 368,813 - -0.8 368,983 + -0.4 368,984 - -0.4 369,100 + -1.1 369,262 + +0.1 369,262 + -0.5 369,263 - -0.5 369,263 - +0.4 369,565 + GFF332 0.46 -0.8 369,826 + GFF332 0.85 -1.1 369,827 - GFF332 0.85 -1.2 369,827 - GFF332 0.85 -1.2 369,847 + GFF332 0.88 -0.2 369,847 + GFF332 0.88 -0.1 369,847 + GFF332 0.88 -0.4 369,848 - GFF332 0.88 -0.1 369,848 - GFF332 0.88 -0.2 369,848 - GFF332 0.88 -0.4 369,995 - GFF333 0.11 -0.1 370,132 + GFF333 0.32 -1.5 370,132 + GFF333 0.32 +0.1 370,133 - GFF333 0.33 -0.6 370,133 - GFF333 0.33 -0.4 370,218 + GFF333 0.46 -2.4 370,219 - GFF333 0.46 -1.6 370,219 - GFF333 0.46 -0.7 370,219 - GFF333 0.46 -1.0 370,500 + GFF333 0.89 -0.5 370,500 + GFF333 0.89 +0.8 370,516 - +1.3 370,539 + -1.1 370,569 + -0.1 370,569 + +0.1 370,587 + +0.0 370,587 + +2.3 370,587 + -0.3 370,588 - -0.2 370,591 + +0.1 370,591 + -0.2 370,592 - -1.9 370,592 - -0.6 370,592 - -1.0 370,592 - +0.8 370,610 + +0.3 370,610 + -1.1 370,611 - -0.6 370,611 - -0.1 370,753 + GFF334 0.26 +0.0 370,753 + GFF334 0.26 -0.0 370,886 + GFF334 0.44 -0.6
Or see this region's nucleotide sequence