Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3223 and GFF3224 are separated by 313 nucleotides GFF3224 and GFF3225 are separated by 54 nucleotides
GFF3223 - Modulator of FtsH protease HflC, at 196,165 to 197,034
GFF3223
GFF3224 - ATP phosphoribosyltransferase regulatory subunit, at 197,348 to 198,535
GFF3224
GFF3225 - Adenylosuccinate synthetase, at 198,590 to 199,879
GFF3225
Position (kb) 197
198
199 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 196.429 kb on + strand, within GFF3223 at 196.429 kb on + strand, within GFF3223 at 196.466 kb on - strand, within GFF3223 at 196.716 kb on + strand, within GFF3223 at 196.716 kb on + strand, within GFF3223 at 196.716 kb on + strand, within GFF3223 at 196.716 kb on + strand, within GFF3223 at 196.717 kb on - strand, within GFF3223 at 196.717 kb on - strand, within GFF3223 at 196.717 kb on - strand, within GFF3223 at 196.717 kb on - strand, within GFF3223 at 196.885 kb on + strand, within GFF3223 at 196.886 kb on - strand, within GFF3223 at 196.918 kb on + strand, within GFF3223 at 196.918 kb on + strand, within GFF3223 at 196.919 kb on - strand, within GFF3223 at 196.919 kb on - strand, within GFF3223 at 196.927 kb on + strand, within GFF3223 at 196.928 kb on - strand, within GFF3223 at 197.108 kb on + strand at 197.108 kb on + strand at 197.108 kb on + strand at 197.108 kb on + strand at 197.108 kb on + strand at 197.394 kb on + strand at 197.394 kb on + strand at 197.394 kb on + strand at 197.542 kb on + strand, within GFF3224 at 197.852 kb on + strand, within GFF3224 at 197.852 kb on + strand, within GFF3224 at 198.137 kb on + strand, within GFF3224 at 198.137 kb on + strand, within GFF3224 at 198.170 kb on + strand, within GFF3224 at 198.239 kb on + strand, within GFF3224 at 198.371 kb on - strand, within GFF3224
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 196,429 + GFF3223 0.30 -0.3 196,429 + GFF3223 0.30 +0.2 196,466 - GFF3223 0.35 -0.8 196,716 + GFF3223 0.63 -1.1 196,716 + GFF3223 0.63 -1.6 196,716 + GFF3223 0.63 +1.2 196,716 + GFF3223 0.63 +0.4 196,717 - GFF3223 0.63 +0.6 196,717 - GFF3223 0.63 +0.3 196,717 - GFF3223 0.63 -0.0 196,717 - GFF3223 0.63 -0.1 196,885 + GFF3223 0.83 +0.6 196,886 - GFF3223 0.83 +1.2 196,918 + GFF3223 0.87 -0.1 196,918 + GFF3223 0.87 -0.1 196,919 - GFF3223 0.87 -0.3 196,919 - GFF3223 0.87 +0.3 196,927 + GFF3223 0.88 +0.6 196,928 - GFF3223 0.88 +0.1 197,108 + -0.4 197,108 + -1.3 197,108 + -0.6 197,108 + -0.3 197,108 + -0.3 197,394 + -2.1 197,394 + -1.4 197,394 + -2.3 197,542 + GFF3224 0.16 -3.3 197,852 + GFF3224 0.42 -3.3 197,852 + GFF3224 0.42 -3.2 198,137 + GFF3224 0.66 -3.5 198,137 + GFF3224 0.66 -3.4 198,170 + GFF3224 0.69 -2.6 198,239 + GFF3224 0.75 -3.8 198,371 - GFF3224 0.86 -1.3
Or see this region's nucleotide sequence