Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF248 and GFF249 are separated by 87 nucleotides GFF249 and GFF250 are separated by 85 nucleotides GFF250 and GFF251 overlap by 8 nucleotides
GFF248 - L-cystine uptake protein TcyP, at 276,530 to 277,918
GFF248
GFF249 - Dihydrofolate reductase type 3, at 278,006 to 278,524
GFF249
GFF250 - putative membrane protein, at 278,610 to 279,983
GFF250
GFF251 - hypothetical protein, at 279,976 to 281,361
GFF251
Position (kb) 278
279
280 Strain fitness (log2 ratio) -1
0
1 at 277.666 kb on + strand, within GFF248 at 277.666 kb on + strand, within GFF248 at 277.667 kb on - strand, within GFF248 at 277.667 kb on - strand, within GFF248 at 277.873 kb on + strand at 277.908 kb on + strand at 277.982 kb on + strand at 278.007 kb on + strand at 278.008 kb on - strand at 278.576 kb on - strand at 278.576 kb on - strand at 278.594 kb on - strand at 279.344 kb on + strand, within GFF250 at 280.163 kb on - strand, within GFF251 at 280.348 kb on + strand, within GFF251 at 280.348 kb on + strand, within GFF251 at 280.349 kb on - strand, within GFF251 at 280.349 kb on - strand, within GFF251 at 280.517 kb on + strand, within GFF251 at 280.517 kb on + strand, within GFF251 at 280.564 kb on + strand, within GFF251 at 280.564 kb on + strand, within GFF251 at 280.564 kb on + strand, within GFF251 at 280.564 kb on + strand, within GFF251 at 280.564 kb on + strand, within GFF251 at 280.565 kb on - strand, within GFF251 at 280.565 kb on - strand, within GFF251 at 280.565 kb on - strand, within GFF251 at 280.813 kb on + strand, within GFF251
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 277,666 + GFF248 0.82 -0.1 277,666 + GFF248 0.82 +0.2 277,667 - GFF248 0.82 +0.8 277,667 - GFF248 0.82 -0.8 277,873 + -0.9 277,908 + +0.6 277,982 + +0.7 278,007 + -1.5 278,008 - -0.4 278,576 - -0.5 278,576 - -0.1 278,594 - +0.1 279,344 + GFF250 0.53 -1.1 280,163 - GFF251 0.13 -0.6 280,348 + GFF251 0.27 -0.2 280,348 + GFF251 0.27 -1.4 280,349 - GFF251 0.27 +0.0 280,349 - GFF251 0.27 +1.2 280,517 + GFF251 0.39 -0.6 280,517 + GFF251 0.39 +1.4 280,564 + GFF251 0.42 +0.5 280,564 + GFF251 0.42 -1.1 280,564 + GFF251 0.42 -0.5 280,564 + GFF251 0.42 -1.0 280,564 + GFF251 0.42 +0.9 280,565 - GFF251 0.42 -0.3 280,565 - GFF251 0.42 +0.3 280,565 - GFF251 0.42 -0.2 280,813 + GFF251 0.60 +0.6
Or see this region's nucleotide sequence