Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF21 and GFF22 overlap by 4 nucleotides GFF22 and GFF23 are separated by 114 nucleotides GFF23 and GFF24 are separated by 282 nucleotides
GFF21 - Phosphoglycolate phosphatase, at 20,332 to 21,150
GFF21
GFF22 - Ribulose-phosphate 3-epimerase, at 21,147 to 21,821
GFF22
GFF23 - Long-chain-alcohol dehydrogenase 1, at 21,936 to 23,084
GFF23
GFF24 - Inner membrane ABC transporter permease protein YdcV, at 23,367 to 24,191
GFF24
Position (kb) 21
22
23
24 Strain fitness (log2 ratio) -2
-1
0
1
2 at 21.841 kb on - strand at 21.841 kb on - strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.862 kb on + strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.863 kb on - strand at 21.864 kb on + strand at 21.865 kb on - strand at 22.002 kb on + strand at 22.231 kb on + strand, within GFF23 at 22.231 kb on + strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.232 kb on - strand, within GFF23 at 22.399 kb on + strand, within GFF23 at 22.483 kb on + strand, within GFF23 at 22.483 kb on + strand, within GFF23 at 22.484 kb on - strand, within GFF23 at 22.484 kb on - strand, within GFF23 at 22.591 kb on + strand, within GFF23 at 22.591 kb on + strand, within GFF23 at 22.592 kb on - strand, within GFF23 at 23.098 kb on + strand at 23.098 kb on + strand at 23.098 kb on + strand at 23.098 kb on + strand at 23.098 kb on + strand at 23.099 kb on - strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.100 kb on + strand at 23.101 kb on - strand at 23.101 kb on - strand at 23.101 kb on - strand at 23.101 kb on - strand at 23.101 kb on - strand at 23.125 kb on + strand at 23.126 kb on - strand at 23.151 kb on - strand at 23.177 kb on + strand at 23.240 kb on + strand at 23.241 kb on - strand at 23.241 kb on - strand at 23.266 kb on + strand at 23.267 kb on - strand at 23.381 kb on + strand at 23.381 kb on + strand at 23.382 kb on - strand at 23.696 kb on + strand, within GFF24 at 23.696 kb on + strand, within GFF24 at 23.696 kb on + strand, within GFF24 at 23.697 kb on - strand, within GFF24 at 23.749 kb on - strand, within GFF24 at 23.783 kb on + strand, within GFF24 at 23.812 kb on + strand, within GFF24 at 23.812 kb on + strand, within GFF24
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 21,841 - -0.1 21,841 - -0.7 21,862 + -0.7 21,862 + -0.5 21,862 + +0.4 21,862 + +0.6 21,862 + -1.4 21,862 + -0.3 21,862 + -1.0 21,862 + +0.5 21,863 - +0.2 21,863 - -2.4 21,863 - -1.0 21,863 - -0.4 21,863 - +0.1 21,863 - -0.9 21,863 - -0.1 21,863 - -0.2 21,863 - -0.8 21,863 - -0.4 21,863 - -0.6 21,863 - +0.8 21,864 + +0.0 21,865 - -0.1 22,002 + +0.4 22,231 + GFF23 0.26 -0.3 22,231 + GFF23 0.26 -0.4 22,232 - GFF23 0.26 +0.3 22,232 - GFF23 0.26 -0.7 22,232 - GFF23 0.26 -0.8 22,232 - GFF23 0.26 +1.3 22,232 - GFF23 0.26 -1.0 22,232 - GFF23 0.26 -1.1 22,232 - GFF23 0.26 -0.3 22,399 + GFF23 0.40 -0.5 22,483 + GFF23 0.48 -1.1 22,483 + GFF23 0.48 -1.8 22,484 - GFF23 0.48 -1.0 22,484 - GFF23 0.48 +0.0 22,591 + GFF23 0.57 +0.4 22,591 + GFF23 0.57 -0.2 22,592 - GFF23 0.57 -0.2 23,098 + +0.1 23,098 + -0.2 23,098 + -0.9 23,098 + +0.1 23,098 + -0.6 23,099 - -0.1 23,100 + +1.8 23,100 + +0.6 23,100 + -0.8 23,100 + +0.4 23,100 + +0.1 23,100 + +0.0 23,100 + +0.1 23,100 + +0.6 23,100 + +0.6 23,101 - -1.5 23,101 - -1.0 23,101 - -0.2 23,101 - +0.3 23,101 - -1.4 23,125 + -1.0 23,126 - -1.5 23,151 - -0.9 23,177 + +0.7 23,240 + +0.9 23,241 - +1.3 23,241 - -0.2 23,266 + +0.9 23,267 - +0.6 23,381 + +0.0 23,381 + -1.0 23,382 - +0.2 23,696 + GFF24 0.40 +0.9 23,696 + GFF24 0.40 -1.0 23,696 + GFF24 0.40 -0.1 23,697 - GFF24 0.40 -0.4 23,749 - GFF24 0.46 +0.3 23,783 + GFF24 0.50 +0.9 23,812 + GFF24 0.54 -0.9 23,812 + GFF24 0.54 +0.3
Or see this region's nucleotide sequence