Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2123 and GFF2124 are separated by 70 nucleotides GFF2124 and GFF2125 are separated by 189 nucleotides GFF2125 and GFF2126 are separated by 218 nucleotides
GFF2123 - hypothetical protein, at 366,213 to 366,683
GFF2123
GFF2124 - Ribosomal small subunit pseudouridine synthase A, at 366,754 to 367,464
GFF2124
GFF2125 - Peptidyl-lysine N-acetyltransferase YjaB, at 367,654 to 368,127
GFF2125
GFF2126 - Ribosomal protein S12 methylthiotransferase RimO, at 368,346 to 369,683
GFF2126
Position (kb) 367
368
369 Strain fitness (log2 ratio) -2
-1
0
1 at 366.666 kb on + strand at 366.667 kb on - strand at 366.667 kb on - strand at 366.674 kb on + strand at 366.675 kb on - strand at 366.690 kb on - strand at 366.690 kb on - strand at 366.718 kb on + strand at 366.719 kb on - strand at 366.755 kb on + strand at 366.779 kb on + strand at 366.780 kb on - strand at 367.037 kb on + strand, within GFF2124 at 367.037 kb on + strand, within GFF2124 at 367.037 kb on + strand, within GFF2124 at 367.037 kb on + strand, within GFF2124 at 367.038 kb on - strand, within GFF2124 at 367.038 kb on - strand, within GFF2124 at 367.038 kb on - strand, within GFF2124 at 367.038 kb on - strand, within GFF2124 at 367.498 kb on + strand at 367.498 kb on + strand at 367.498 kb on + strand at 367.499 kb on - strand at 367.499 kb on - strand at 367.499 kb on - strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.645 kb on + strand at 367.646 kb on - strand at 367.646 kb on - strand at 367.646 kb on - strand at 367.646 kb on - strand at 367.646 kb on - strand at 367.646 kb on - strand at 367.695 kb on + strand at 367.892 kb on + strand, within GFF2125 at 368.018 kb on + strand, within GFF2125 at 368.018 kb on + strand, within GFF2125 at 368.018 kb on + strand, within GFF2125 at 368.018 kb on + strand, within GFF2125 at 368.018 kb on + strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.019 kb on - strand, within GFF2125 at 368.085 kb on - strand at 368.085 kb on - strand at 368.283 kb on - strand at 368.283 kb on - strand at 368.283 kb on - strand at 368.287 kb on - strand at 368.333 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.347 kb on + strand at 368.348 kb on - strand at 368.348 kb on - strand at 368.348 kb on - strand at 368.348 kb on - strand at 368.348 kb on - strand at 368.722 kb on + strand, within GFF2126 at 368.723 kb on - strand, within GFF2126 at 368.959 kb on + strand, within GFF2126 at 368.965 kb on + strand, within GFF2126 at 368.965 kb on + strand, within GFF2126 at 368.996 kb on + strand, within GFF2126 at 368.996 kb on + strand, within GFF2126 at 368.997 kb on - strand, within GFF2126 at 368.997 kb on - strand, within GFF2126 at 369.061 kb on + strand, within GFF2126 at 369.062 kb on - strand, within GFF2126 at 369.062 kb on - strand, within GFF2126
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 366,666 + -0.6 366,667 - +0.1 366,667 - -0.4 366,674 + +0.3 366,675 - -0.4 366,690 - +0.8 366,690 - -0.4 366,718 + +0.1 366,719 - -0.4 366,755 + -0.3 366,779 + +0.7 366,780 - -1.5 367,037 + GFF2124 0.40 -0.0 367,037 + GFF2124 0.40 -0.2 367,037 + GFF2124 0.40 -0.5 367,037 + GFF2124 0.40 -0.2 367,038 - GFF2124 0.40 +0.2 367,038 - GFF2124 0.40 -0.0 367,038 - GFF2124 0.40 -0.6 367,038 - GFF2124 0.40 +0.3 367,498 + -0.4 367,498 + -0.9 367,498 + +0.3 367,499 - -0.6 367,499 - -0.5 367,499 - +0.3 367,645 + +0.1 367,645 + +0.5 367,645 + +0.0 367,645 + +0.2 367,645 + +1.5 367,645 + +0.3 367,645 + -0.5 367,646 - -0.4 367,646 - +0.2 367,646 - +0.1 367,646 - +0.2 367,646 - -0.5 367,646 - -0.1 367,695 + +0.5 367,892 + GFF2125 0.50 -1.0 368,018 + GFF2125 0.77 -1.7 368,018 + GFF2125 0.77 -0.7 368,018 + GFF2125 0.77 -1.8 368,018 + GFF2125 0.77 -1.0 368,018 + GFF2125 0.77 +0.4 368,019 - GFF2125 0.77 -0.7 368,019 - GFF2125 0.77 +0.3 368,019 - GFF2125 0.77 -0.5 368,019 - GFF2125 0.77 -0.6 368,019 - GFF2125 0.77 -0.7 368,019 - GFF2125 0.77 -0.0 368,019 - GFF2125 0.77 -0.7 368,085 - +0.9 368,085 - -0.4 368,283 - +0.0 368,283 - +0.1 368,283 - -0.3 368,287 - -0.3 368,333 + +0.4 368,347 + -0.2 368,347 + -1.3 368,347 + -0.1 368,347 + +0.1 368,347 + -0.3 368,347 + +0.3 368,347 + +1.0 368,347 + +0.3 368,347 + -0.3 368,348 - -0.5 368,348 - -0.4 368,348 - -0.9 368,348 - -0.2 368,348 - -0.9 368,722 + GFF2126 0.28 -0.1 368,723 - GFF2126 0.28 -0.3 368,959 + GFF2126 0.46 +0.1 368,965 + GFF2126 0.46 -1.6 368,965 + GFF2126 0.46 -0.4 368,996 + GFF2126 0.49 -0.4 368,996 + GFF2126 0.49 -0.6 368,997 - GFF2126 0.49 +0.5 368,997 - GFF2126 0.49 +0.0 369,061 + GFF2126 0.53 +0.0 369,062 - GFF2126 0.54 -0.3 369,062 - GFF2126 0.54 +0.5
Or see this region's nucleotide sequence