Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF199 and GFF200 are separated by 162 nucleotides GFF200 and GFF201 are separated by 317 nucleotides GFF201 and GFF202 overlap by 1 nucleotides
GFF199 - Glutathione synthetase, at 230,382 to 231,353
GFF199
GFF200 - hypothetical protein, at 231,516 to 232,415
GFF200
GFF201 - hypothetical protein, at 232,733 to 233,305
GFF201
GFF202 - Putative pre-16S rRNA nuclease, at 233,305 to 233,742
GFF202
Position (kb) 231
232
233 Strain fitness (log2 ratio) -2
-1
0
1
2 at 230.682 kb on + strand, within GFF199 at 230.683 kb on - strand, within GFF199 at 230.683 kb on - strand, within GFF199 at 230.821 kb on + strand, within GFF199 at 230.822 kb on - strand, within GFF199 at 230.982 kb on + strand, within GFF199 at 230.982 kb on + strand, within GFF199 at 230.982 kb on + strand, within GFF199 at 231.045 kb on + strand, within GFF199 at 231.045 kb on + strand, within GFF199 at 231.419 kb on + strand at 231.455 kb on + strand at 231.474 kb on - strand at 231.474 kb on - strand at 231.588 kb on - strand at 232.047 kb on + strand, within GFF200 at 232.048 kb on - strand, within GFF200 at 232.048 kb on - strand, within GFF200 at 232.113 kb on + strand, within GFF200 at 232.114 kb on - strand, within GFF200 at 232.162 kb on - strand, within GFF200 at 232.191 kb on + strand, within GFF200 at 232.191 kb on + strand, within GFF200 at 232.192 kb on - strand, within GFF200 at 232.239 kb on + strand, within GFF200 at 232.240 kb on - strand, within GFF200 at 232.417 kb on + strand at 232.418 kb on - strand at 232.422 kb on - strand at 232.422 kb on - strand at 232.438 kb on + strand at 232.439 kb on - strand at 232.479 kb on - strand at 232.557 kb on + strand at 232.557 kb on + strand at 232.557 kb on + strand at 232.558 kb on - strand at 232.577 kb on - strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.593 kb on + strand at 232.594 kb on - strand at 232.594 kb on - strand at 232.594 kb on - strand at 232.594 kb on - strand at 232.594 kb on - strand at 232.594 kb on - strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.595 kb on + strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.596 kb on - strand at 232.615 kb on - strand at 232.615 kb on - strand at 232.615 kb on - strand at 232.725 kb on + strand at 232.726 kb on - strand at 232.754 kb on + strand at 232.823 kb on + strand, within GFF201 at 232.823 kb on + strand, within GFF201 at 233.129 kb on + strand, within GFF201 at 233.130 kb on - strand, within GFF201
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 230,682 + GFF199 0.31 +0.8 230,683 - GFF199 0.31 -1.2 230,683 - GFF199 0.31 -0.4 230,821 + GFF199 0.45 +1.2 230,822 - GFF199 0.45 +0.8 230,982 + GFF199 0.62 -0.3 230,982 + GFF199 0.62 +0.4 230,982 + GFF199 0.62 -0.2 231,045 + GFF199 0.68 -1.7 231,045 + GFF199 0.68 +0.2 231,419 + +0.5 231,455 + +0.8 231,474 - -1.1 231,474 - -0.9 231,588 - +2.4 232,047 + GFF200 0.59 -0.2 232,048 - GFF200 0.59 -0.2 232,048 - GFF200 0.59 -1.8 232,113 + GFF200 0.66 -0.2 232,114 - GFF200 0.66 -1.2 232,162 - GFF200 0.72 -1.0 232,191 + GFF200 0.75 +0.5 232,191 + GFF200 0.75 -1.1 232,192 - GFF200 0.75 -1.0 232,239 + GFF200 0.80 +0.6 232,240 - GFF200 0.80 -0.5 232,417 + +0.4 232,418 - -0.1 232,422 - +0.5 232,422 - +0.1 232,438 + +0.1 232,439 - -0.0 232,479 - +0.6 232,557 + +0.0 232,557 + -1.0 232,557 + -0.1 232,558 - +0.1 232,577 - +1.0 232,593 + -0.0 232,593 + -1.5 232,593 + +0.0 232,593 + -0.0 232,593 + -0.2 232,593 + -1.0 232,593 + -1.0 232,593 + +0.5 232,593 + -1.2 232,594 - +0.6 232,594 - +1.5 232,594 - -0.4 232,594 - -0.3 232,594 - +0.0 232,594 - -0.3 232,595 + -0.7 232,595 + -0.4 232,595 + -0.4 232,595 + -0.2 232,595 + +0.5 232,595 + -0.2 232,595 + +0.4 232,595 + +1.2 232,596 - +1.2 232,596 - +0.3 232,596 - +1.1 232,596 - +0.3 232,596 - -0.1 232,596 - -0.5 232,596 - +0.6 232,615 - -1.3 232,615 - -0.2 232,615 - +0.5 232,725 + -0.4 232,726 - -1.6 232,754 + +0.8 232,823 + GFF201 0.16 +1.0 232,823 + GFF201 0.16 +0.4 233,129 + GFF201 0.69 -0.9 233,130 - GFF201 0.69 -1.2
Or see this region's nucleotide sequence