Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1481 and GFF1482 are separated by 260 nucleotides GFF1482 and GFF1483 are separated by 66 nucleotides
GFF1481 - Exodeoxyribonuclease III, at 257,198 to 258,010
GFF1481
GFF1482 - hypothetical protein, at 258,271 to 258,921
GFF1482
GFF1483 - Translocation and assembly module subunit TamA, at 258,988 to 260,715
GFF1483
Position (kb) 258
259 Strain fitness (log2 ratio) -2
-1
0
1 at 257.412 kb on + strand, within GFF1481 at 257.413 kb on - strand, within GFF1481 at 257.682 kb on + strand, within GFF1481 at 257.779 kb on + strand, within GFF1481 at 257.779 kb on + strand, within GFF1481 at 257.779 kb on + strand, within GFF1481 at 257.780 kb on - strand, within GFF1481 at 258.041 kb on - strand at 258.041 kb on - strand at 258.041 kb on - strand at 258.041 kb on - strand at 258.041 kb on - strand at 258.041 kb on - strand at 258.180 kb on + strand at 258.180 kb on + strand at 258.180 kb on + strand at 258.180 kb on + strand at 258.181 kb on - strand at 258.181 kb on - strand at 258.182 kb on + strand at 258.182 kb on + strand at 258.182 kb on + strand at 258.182 kb on + strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.183 kb on - strand at 258.322 kb on + strand at 258.350 kb on - strand, within GFF1482 at 258.814 kb on + strand, within GFF1482 at 258.816 kb on + strand, within GFF1482 at 258.902 kb on + strand at 258.943 kb on + strand at 258.944 kb on - strand at 258.952 kb on + strand at 258.952 kb on + strand at 258.952 kb on + strand at 258.952 kb on + strand at 258.952 kb on + strand at 258.953 kb on - strand at 258.953 kb on - strand at 258.953 kb on - strand at 258.953 kb on - strand at 258.974 kb on + strand at 258.987 kb on + strand at 258.987 kb on + strand at 259.008 kb on + strand at 259.070 kb on + strand at 259.070 kb on + strand at 259.070 kb on + strand at 259.071 kb on - strand at 259.071 kb on - strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.109 kb on + strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.110 kb on - strand at 259.117 kb on + strand at 259.117 kb on + strand at 259.117 kb on + strand at 259.117 kb on + strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.118 kb on - strand at 259.214 kb on - strand, within GFF1483 at 259.409 kb on - strand, within GFF1483 at 259.531 kb on + strand, within GFF1483 at 259.640 kb on - strand, within GFF1483 at 259.640 kb on - strand, within GFF1483 at 259.640 kb on - strand, within GFF1483 at 259.691 kb on - strand, within GFF1483 at 259.691 kb on - strand, within GFF1483 at 259.876 kb on + strand, within GFF1483 at 259.876 kb on + strand, within GFF1483 at 259.877 kb on - strand, within GFF1483
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 257,412 + GFF1481 0.26 +0.2 257,413 - GFF1481 0.26 +0.9 257,682 + GFF1481 0.60 +0.1 257,779 + GFF1481 0.71 +0.8 257,779 + GFF1481 0.71 -0.1 257,779 + GFF1481 0.71 +0.2 257,780 - GFF1481 0.72 +0.9 258,041 - -1.8 258,041 - -0.8 258,041 - +0.2 258,041 - -1.3 258,041 - +0.7 258,041 - +0.2 258,180 + +0.3 258,180 + -0.2 258,180 + +1.2 258,180 + -0.5 258,181 - -0.8 258,181 - -0.9 258,182 + -0.5 258,182 + +1.7 258,182 + +0.1 258,182 + -0.7 258,183 - -1.4 258,183 - +0.6 258,183 - -0.7 258,183 - +0.2 258,183 - -0.1 258,183 - -0.4 258,183 - +0.0 258,322 + +0.6 258,350 - GFF1482 0.12 -0.7 258,814 + GFF1482 0.83 -1.1 258,816 + GFF1482 0.84 -1.1 258,902 + -0.8 258,943 + -1.4 258,944 - +0.2 258,952 + +0.4 258,952 + +0.3 258,952 + -0.9 258,952 + -0.4 258,952 + -0.5 258,953 - -0.7 258,953 - +0.3 258,953 - -0.4 258,953 - -0.4 258,974 + -0.9 258,987 + +0.0 258,987 + -1.0 259,008 + -1.1 259,070 + +0.4 259,070 + -2.2 259,070 + -0.7 259,071 - +0.8 259,071 - +0.5 259,109 + -0.3 259,109 + -0.7 259,109 + -0.5 259,109 + +0.1 259,109 + -1.3 259,109 + -1.1 259,109 + -0.1 259,109 + -0.6 259,109 + +0.7 259,110 - -0.1 259,110 - -0.6 259,110 - -1.4 259,110 - -1.8 259,110 - +0.7 259,110 - -0.1 259,110 - -0.8 259,110 - -0.3 259,110 - +0.4 259,110 - +0.7 259,110 - -0.2 259,110 - -1.2 259,110 - -0.0 259,110 - -1.5 259,110 - -1.0 259,110 - -0.1 259,117 + -0.8 259,117 + -0.3 259,117 + +0.5 259,117 + +0.2 259,118 - +1.2 259,118 - -2.5 259,118 - +0.1 259,118 - -0.2 259,118 - +0.2 259,118 - -0.1 259,118 - +0.9 259,214 - GFF1483 0.13 +0.3 259,409 - GFF1483 0.24 +0.1 259,531 + GFF1483 0.31 -0.1 259,640 - GFF1483 0.38 -0.2 259,640 - GFF1483 0.38 +0.2 259,640 - GFF1483 0.38 -0.5 259,691 - GFF1483 0.41 +1.2 259,691 - GFF1483 0.41 -0.9 259,876 + GFF1483 0.51 -1.4 259,876 + GFF1483 0.51 +1.1 259,877 - GFF1483 0.51 -0.3
Or see this region's nucleotide sequence