Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1193 and GFF1194 are separated by 230 nucleotides GFF1194 and GFF1195 are separated by 110 nucleotides GFF1195 and GFF1196 are separated by 43 nucleotides
GFF1193 - HTH-type transcriptional activator RhaR, at 530,408 to 531,391
GFF1193
GFF1194 - Bifunctional protein GlmU, at 531,622 to 532,233
GFF1194
GFF1195 - hypothetical protein, at 532,344 to 532,643
GFF1195
GFF1196 - hypothetical protein, at 532,687 to 533,589
GFF1196
Position (kb) 532
533 Strain fitness (log2 ratio) -2
-1
0
1 at 531.437 kb on + strand at 531.438 kb on - strand at 531.457 kb on + strand at 531.457 kb on + strand at 531.458 kb on - strand at 531.458 kb on - strand at 531.512 kb on - strand at 531.512 kb on - strand at 531.547 kb on - strand at 531.603 kb on + strand at 531.604 kb on - strand at 531.821 kb on + strand, within GFF1194 at 531.925 kb on - strand, within GFF1194 at 531.971 kb on + strand, within GFF1194 at 531.972 kb on - strand, within GFF1194 at 531.972 kb on - strand, within GFF1194 at 532.085 kb on + strand, within GFF1194 at 532.086 kb on - strand, within GFF1194 at 532.208 kb on + strand at 532.208 kb on + strand at 532.208 kb on + strand at 532.208 kb on + strand at 532.209 kb on - strand at 532.312 kb on + strand at 532.312 kb on + strand at 532.312 kb on + strand at 532.313 kb on - strand at 532.313 kb on - strand at 532.319 kb on - strand at 532.335 kb on + strand at 532.405 kb on + strand, within GFF1195 at 532.405 kb on + strand, within GFF1195 at 532.425 kb on - strand, within GFF1195 at 532.432 kb on + strand, within GFF1195 at 532.432 kb on + strand, within GFF1195 at 532.433 kb on - strand, within GFF1195 at 532.438 kb on + strand, within GFF1195 at 532.675 kb on + strand at 532.675 kb on + strand at 532.676 kb on - strand at 532.955 kb on + strand, within GFF1196 at 532.961 kb on + strand, within GFF1196 at 532.961 kb on + strand, within GFF1196 at 532.961 kb on + strand, within GFF1196 at 532.961 kb on + strand, within GFF1196 at 532.962 kb on - strand, within GFF1196 at 532.962 kb on - strand, within GFF1196 at 532.962 kb on - strand, within GFF1196 at 532.962 kb on - strand, within GFF1196 at 533.056 kb on - strand, within GFF1196 at 533.056 kb on - strand, within GFF1196 at 533.078 kb on + strand, within GFF1196 at 533.079 kb on - strand, within GFF1196 at 533.130 kb on + strand, within GFF1196 at 533.618 kb on + strand at 533.626 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 531,437 + -0.8 531,438 - -0.6 531,457 + -0.6 531,457 + +1.4 531,458 - -1.2 531,458 - +0.4 531,512 - +0.6 531,512 - -0.1 531,547 - +0.3 531,603 + +0.0 531,604 - -0.5 531,821 + GFF1194 0.33 -0.4 531,925 - GFF1194 0.50 +0.5 531,971 + GFF1194 0.57 +0.7 531,972 - GFF1194 0.57 -0.6 531,972 - GFF1194 0.57 -0.2 532,085 + GFF1194 0.76 -0.7 532,086 - GFF1194 0.76 +0.0 532,208 + -1.7 532,208 + +0.6 532,208 + -1.0 532,208 + -2.7 532,209 - -0.1 532,312 + +0.6 532,312 + -0.2 532,312 + +0.6 532,313 - +0.7 532,313 - -0.3 532,319 - +0.5 532,335 + +0.4 532,405 + GFF1195 0.20 -0.6 532,405 + GFF1195 0.20 -0.1 532,425 - GFF1195 0.27 +0.0 532,432 + GFF1195 0.29 -0.6 532,432 + GFF1195 0.29 -1.4 532,433 - GFF1195 0.30 -1.2 532,438 + GFF1195 0.31 -1.7 532,675 + -1.0 532,675 + -0.4 532,676 - -0.6 532,955 + GFF1196 0.30 -0.3 532,961 + GFF1196 0.30 +0.2 532,961 + GFF1196 0.30 +0.4 532,961 + GFF1196 0.30 +0.1 532,961 + GFF1196 0.30 -1.2 532,962 - GFF1196 0.30 -0.0 532,962 - GFF1196 0.30 -0.2 532,962 - GFF1196 0.30 +0.7 532,962 - GFF1196 0.30 -1.0 533,056 - GFF1196 0.41 -1.4 533,056 - GFF1196 0.41 -0.2 533,078 + GFF1196 0.43 -0.3 533,079 - GFF1196 0.43 -1.9 533,130 + GFF1196 0.49 +0.3 533,618 + +0.1 533,626 + +1.2
Or see this region's nucleotide sequence