Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1128 and GFF1129 are separated by 238 nucleotides GFF1129 and GFF1130 are separated by 255 nucleotides GFF1130 and GFF1131 are separated by 171 nucleotides
GFF1128 - HTH-type transcriptional regulator DmlR, at 469,193 to 470,119
GFF1128
GFF1129 - DNA nickase, at 470,358 to 470,834
GFF1129
GFF1130 - hypothetical protein, at 471,090 to 471,305
GFF1130
GFF1131 - hypothetical protein, at 471,477 to 472,604
GFF1131
Position (kb) 470
471 Strain fitness (log2 ratio) -1
0
1 at 469.385 kb on - strand, within GFF1128 at 469.385 kb on - strand, within GFF1128 at 469.593 kb on - strand, within GFF1128 at 469.593 kb on - strand, within GFF1128 at 469.724 kb on + strand, within GFF1128 at 469.920 kb on + strand, within GFF1128 at 469.920 kb on + strand, within GFF1128 at 469.921 kb on - strand, within GFF1128 at 470.018 kb on + strand, within GFF1128 at 470.278 kb on + strand at 470.278 kb on + strand at 470.279 kb on - strand at 470.279 kb on - strand at 470.282 kb on + strand at 470.282 kb on + strand at 470.282 kb on + strand at 470.283 kb on - strand at 470.283 kb on - strand at 470.283 kb on - strand at 470.283 kb on - strand at 470.623 kb on + strand, within GFF1129 at 470.624 kb on - strand, within GFF1129 at 470.624 kb on - strand, within GFF1129 at 470.626 kb on + strand, within GFF1129 at 470.626 kb on + strand, within GFF1129 at 470.627 kb on - strand, within GFF1129 at 470.894 kb on + strand at 471.029 kb on + strand at 471.029 kb on + strand at 471.029 kb on + strand at 471.029 kb on + strand at 471.030 kb on - strand at 471.030 kb on - strand at 471.030 kb on - strand at 471.030 kb on - strand at 471.030 kb on - strand at 471.030 kb on - strand at 471.031 kb on + strand at 471.031 kb on + strand at 471.031 kb on + strand at 471.031 kb on + strand at 471.031 kb on + strand at 471.031 kb on + strand at 471.032 kb on - strand at 471.032 kb on - strand at 471.032 kb on - strand at 471.032 kb on - strand at 471.032 kb on - strand at 471.125 kb on + strand, within GFF1130 at 471.125 kb on + strand, within GFF1130 at 471.125 kb on + strand, within GFF1130 at 471.125 kb on + strand, within GFF1130 at 471.126 kb on - strand, within GFF1130 at 471.126 kb on - strand, within GFF1130 at 471.126 kb on - strand, within GFF1130 at 471.126 kb on - strand, within GFF1130 at 471.204 kb on - strand, within GFF1130 at 471.204 kb on - strand, within GFF1130 at 471.207 kb on - strand, within GFF1130 at 471.305 kb on + strand at 471.306 kb on - strand at 471.306 kb on - strand at 471.306 kb on - strand at 471.311 kb on + strand at 471.312 kb on - strand at 471.312 kb on - strand at 471.312 kb on - strand at 471.312 kb on - strand at 471.432 kb on + strand at 471.432 kb on + strand at 471.432 kb on + strand at 471.432 kb on + strand at 471.433 kb on - strand at 471.433 kb on - strand at 471.433 kb on - strand at 471.434 kb on + strand at 471.434 kb on + strand at 471.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 469,385 - GFF1128 0.21 -0.4 469,385 - GFF1128 0.21 -0.1 469,593 - GFF1128 0.43 -1.6 469,593 - GFF1128 0.43 +0.2 469,724 + GFF1128 0.57 +0.0 469,920 + GFF1128 0.78 +0.3 469,920 + GFF1128 0.78 -0.1 469,921 - GFF1128 0.79 +0.1 470,018 + GFF1128 0.89 +0.6 470,278 + -0.2 470,278 + -0.7 470,279 - -0.5 470,279 - -0.3 470,282 + +1.1 470,282 + +0.6 470,282 + -0.9 470,283 - +0.6 470,283 - +0.2 470,283 - +0.4 470,283 - -0.5 470,623 + GFF1129 0.56 -0.5 470,624 - GFF1129 0.56 -0.4 470,624 - GFF1129 0.56 -0.6 470,626 + GFF1129 0.56 -0.0 470,626 + GFF1129 0.56 +0.0 470,627 - GFF1129 0.56 -1.0 470,894 + -1.3 471,029 + -0.6 471,029 + -0.8 471,029 + -0.1 471,029 + +0.2 471,030 - -0.2 471,030 - +0.3 471,030 - -0.5 471,030 - +0.3 471,030 - +0.8 471,030 - +0.1 471,031 + +1.1 471,031 + -1.4 471,031 + -0.6 471,031 + +0.6 471,031 + -0.6 471,031 + -0.2 471,032 - +0.0 471,032 - +0.4 471,032 - -0.0 471,032 - +1.1 471,032 - -0.5 471,125 + GFF1130 0.16 -1.0 471,125 + GFF1130 0.16 -0.4 471,125 + GFF1130 0.16 +0.4 471,125 + GFF1130 0.16 -0.2 471,126 - GFF1130 0.17 -0.5 471,126 - GFF1130 0.17 +0.5 471,126 - GFF1130 0.17 -0.6 471,126 - GFF1130 0.17 -0.9 471,204 - GFF1130 0.53 -0.6 471,204 - GFF1130 0.53 +0.2 471,207 - GFF1130 0.54 +0.2 471,305 + +1.7 471,306 - +0.4 471,306 - -0.0 471,306 - +0.3 471,311 + +0.3 471,312 - -1.1 471,312 - -1.1 471,312 - +0.4 471,312 - +1.0 471,432 + -0.2 471,432 + +0.4 471,432 + -0.2 471,432 + -0.0 471,433 - +0.3 471,433 - -1.6 471,433 - -0.5 471,434 + -0.2 471,434 + -0.2 471,454 + -0.2
Or see this region's nucleotide sequence