Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02884

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02883 and MPMX26_02884 are separated by 52 nucleotidesMPMX26_02884 and MPMX26_02885 are separated by 313 nucleotides MPMX26_02883: MPMX26_02883 - Putative competence-damage inducible protein, at 2,983,620 to 2,984,090 _02883 MPMX26_02884: MPMX26_02884 - Catalase HPII, at 2,984,143 to 2,986,266 _02884 MPMX26_02885: MPMX26_02885 - hypothetical protein, at 2,986,580 to 2,987,224 _02885 Position (kb) 2984 2985 2986 2987Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2983.587 kb on + strandat 2983.595 kb on + strandat 2983.679 kb on + strand, within MPMX26_02883at 2983.754 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.829 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.910 kb on + strand, within MPMX26_02883at 2984.005 kb on + strand, within MPMX26_02883at 2984.012 kb on + strand, within MPMX26_02883at 2984.051 kb on + strandat 2984.051 kb on + strandat 2984.203 kb on + strandat 2984.211 kb on + strandat 2984.224 kb on + strandat 2984.312 kb on + strandat 2984.312 kb on + strandat 2984.404 kb on + strand, within MPMX26_02884at 2985.153 kb on + strand, within MPMX26_02884at 2985.213 kb on + strand, within MPMX26_02884at 2985.261 kb on + strand, within MPMX26_02884at 2985.264 kb on + strand, within MPMX26_02884at 2985.274 kb on + strand, within MPMX26_02884at 2985.343 kb on + strand, within MPMX26_02884at 2985.402 kb on + strand, within MPMX26_02884at 2985.426 kb on + strand, within MPMX26_02884at 2985.497 kb on + strand, within MPMX26_02884at 2985.570 kb on + strand, within MPMX26_02884at 2985.607 kb on + strand, within MPMX26_02884at 2985.812 kb on + strand, within MPMX26_02884at 2985.826 kb on + strand, within MPMX26_02884at 2985.862 kb on + strand, within MPMX26_02884at 2985.900 kb on + strand, within MPMX26_02884at 2985.972 kb on + strand, within MPMX26_02884at 2986.137 kb on - strandat 2986.147 kb on + strandat 2986.168 kb on + strandat 2986.176 kb on + strandat 2986.186 kb on + strandat 2986.195 kb on + strandat 2986.202 kb on + strandat 2986.202 kb on + strandat 2986.212 kb on + strandat 2986.828 kb on + strand, within MPMX26_02885at 2987.011 kb on - strand, within MPMX26_02885

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,983,587 + +0.5
2,983,595 + +0.5
2,983,679 + MPMX26_02883 0.13 -0.6
2,983,754 + MPMX26_02883 0.28 +0.6
2,983,817 + MPMX26_02883 0.42 +0.7
2,983,817 + MPMX26_02883 0.42 -0.5
2,983,817 + MPMX26_02883 0.42 +0.2
2,983,817 + MPMX26_02883 0.42 -0.0
2,983,817 + MPMX26_02883 0.42 -1.1
2,983,817 + MPMX26_02883 0.42 +0.9
2,983,817 + MPMX26_02883 0.42 +0.5
2,983,817 + MPMX26_02883 0.42 +0.5
2,983,817 + MPMX26_02883 0.42 -1.0
2,983,817 + MPMX26_02883 0.42 -0.0
2,983,817 + MPMX26_02883 0.42 -0.2
2,983,817 + MPMX26_02883 0.42 -0.7
2,983,817 + MPMX26_02883 0.42 -0.1
2,983,817 + MPMX26_02883 0.42 -0.2
2,983,817 + MPMX26_02883 0.42 +2.4
2,983,817 + MPMX26_02883 0.42 -0.0
2,983,829 + MPMX26_02883 0.44 +0.4
2,983,895 + MPMX26_02883 0.58 +0.2
2,983,895 + MPMX26_02883 0.58 -1.4
2,983,895 + MPMX26_02883 0.58 -0.8
2,983,895 + MPMX26_02883 0.58 -0.6
2,983,900 + MPMX26_02883 0.59 +1.0
2,983,900 + MPMX26_02883 0.59 -0.8
2,983,900 + MPMX26_02883 0.59 -3.3
2,983,900 + MPMX26_02883 0.59 +0.4
2,983,905 + MPMX26_02883 0.61 +1.5
2,983,905 + MPMX26_02883 0.61 +0.4
2,983,905 + MPMX26_02883 0.61 -1.5
2,983,910 + MPMX26_02883 0.62 -0.8
2,984,005 + MPMX26_02883 0.82 +1.7
2,984,012 + MPMX26_02883 0.83 -0.0
2,984,051 + +0.8
2,984,051 + +0.3
2,984,203 + +0.8
2,984,211 + +0.7
2,984,224 + +0.8
2,984,312 + +0.7
2,984,312 + -0.6
2,984,404 + MPMX26_02884 0.12 +0.9
2,985,153 + MPMX26_02884 0.48 +1.1
2,985,213 + MPMX26_02884 0.50 +0.3
2,985,261 + MPMX26_02884 0.53 +1.2
2,985,264 + MPMX26_02884 0.53 +0.5
2,985,274 + MPMX26_02884 0.53 +0.8
2,985,343 + MPMX26_02884 0.56 -1.2
2,985,402 + MPMX26_02884 0.59 +0.1
2,985,426 + MPMX26_02884 0.60 +0.1
2,985,497 + MPMX26_02884 0.64 -1.1
2,985,570 + MPMX26_02884 0.67 -0.4
2,985,607 + MPMX26_02884 0.69 +0.5
2,985,812 + MPMX26_02884 0.79 +1.0
2,985,826 + MPMX26_02884 0.79 +0.8
2,985,862 + MPMX26_02884 0.81 -0.2
2,985,900 + MPMX26_02884 0.83 +1.5
2,985,972 + MPMX26_02884 0.86 +1.2
2,986,137 - +0.2
2,986,147 + -0.7
2,986,168 + -1.2
2,986,176 + +0.2
2,986,186 + +0.8
2,986,195 + +1.2
2,986,202 + +0.8
2,986,202 + -0.0
2,986,212 + +0.1
2,986,828 + MPMX26_02885 0.38 +0.0
2,987,011 - MPMX26_02885 0.67 +1.4

Or see this region's nucleotide sequence