Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02580

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02579 and MPMX26_02580 are separated by 22 nucleotidesMPMX26_02580 and MPMX26_02581 are separated by 59 nucleotides MPMX26_02579: MPMX26_02579 - hypothetical protein, at 2,670,136 to 2,672,085 _02579 MPMX26_02580: MPMX26_02580 - hypothetical protein, at 2,672,108 to 2,673,274 _02580 MPMX26_02581: MPMX26_02581 - hypothetical protein, at 2,673,334 to 2,674,998 _02581 Position (kb) 2672 2673 2674Strain fitness (log2 ratio) -1 0 1 2 3at 2672.049 kb on - strandat 2672.899 kb on + strand, within MPMX26_02580at 2672.917 kb on + strand, within MPMX26_02580at 2672.927 kb on + strand, within MPMX26_02580at 2672.968 kb on + strand, within MPMX26_02580at 2672.968 kb on + strand, within MPMX26_02580at 2672.968 kb on + strand, within MPMX26_02580at 2672.968 kb on + strand, within MPMX26_02580at 2672.978 kb on + strand, within MPMX26_02580at 2672.978 kb on + strand, within MPMX26_02580at 2672.980 kb on + strand, within MPMX26_02580at 2673.065 kb on + strand, within MPMX26_02580at 2673.100 kb on + strand, within MPMX26_02580at 2673.118 kb on + strand, within MPMX26_02580at 2673.153 kb on + strand, within MPMX26_02580at 2673.159 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strandat 2673.207 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,672,049 - +0.7
2,672,899 + MPMX26_02580 0.68 +0.8
2,672,917 + MPMX26_02580 0.69 +1.5
2,672,927 + MPMX26_02580 0.70 -0.1
2,672,968 + MPMX26_02580 0.74 +0.9
2,672,968 + MPMX26_02580 0.74 +0.1
2,672,968 + MPMX26_02580 0.74 -0.2
2,672,968 + MPMX26_02580 0.74 +0.2
2,672,978 + MPMX26_02580 0.75 +0.5
2,672,978 + MPMX26_02580 0.75 +1.7
2,672,980 + MPMX26_02580 0.75 +0.3
2,673,065 + MPMX26_02580 0.82 -0.2
2,673,100 + MPMX26_02580 0.85 +0.1
2,673,118 + MPMX26_02580 0.87 -1.4
2,673,153 + MPMX26_02580 0.90 -0.1
2,673,159 + -0.0
2,673,207 + +3.0
2,673,207 + +0.9
2,673,207 + +0.2
2,673,207 + +1.3
2,673,207 + -0.0
2,673,207 + -1.2
2,673,207 + -0.1
2,673,207 + -0.8

Or see this region's nucleotide sequence