Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02526

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02525 and MPMX26_02526 are separated by 366 nucleotidesMPMX26_02526 and MPMX26_02527 are separated by 144 nucleotidesMPMX26_02527 and MPMX26_02528 are separated by 65 nucleotides MPMX26_02525: MPMX26_02525 - Iron-sulfur cluster carrier protein, at 2,612,153 to 2,613,382 _02525 MPMX26_02526: MPMX26_02526 - Methionine--tRNA ligase, at 2,613,749 to 2,615,809 _02526 MPMX26_02527: MPMX26_02527 - hypothetical protein, at 2,615,954 to 2,616,310 _02527 MPMX26_02528: MPMX26_02528 - Threonine efflux protein, at 2,616,376 to 2,616,999 _02528 Position (kb) 2613 2614 2615 2616Strain fitness (log2 ratio) -3 -2 -1 0 1at 2612.764 kb on + strand, within MPMX26_02525at 2612.772 kb on - strand, within MPMX26_02525at 2612.772 kb on - strand, within MPMX26_02525at 2612.772 kb on - strand, within MPMX26_02525at 2612.782 kb on - strand, within MPMX26_02525at 2612.783 kb on + strand, within MPMX26_02525at 2612.787 kb on - strand, within MPMX26_02525at 2612.850 kb on + strand, within MPMX26_02525at 2612.855 kb on + strand, within MPMX26_02525at 2612.879 kb on - strand, within MPMX26_02525at 2612.990 kb on - strand, within MPMX26_02525at 2613.006 kb on + strand, within MPMX26_02525at 2613.015 kb on - strand, within MPMX26_02525at 2613.015 kb on - strand, within MPMX26_02525at 2613.015 kb on - strand, within MPMX26_02525at 2613.015 kb on - strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.017 kb on + strand, within MPMX26_02525at 2613.020 kb on - strand, within MPMX26_02525at 2613.020 kb on - strand, within MPMX26_02525at 2613.025 kb on - strand, within MPMX26_02525at 2613.025 kb on - strand, within MPMX26_02525at 2613.025 kb on - strand, within MPMX26_02525at 2613.025 kb on - strand, within MPMX26_02525at 2613.025 kb on - strand, within MPMX26_02525at 2613.046 kb on + strand, within MPMX26_02525at 2613.071 kb on + strand, within MPMX26_02525at 2613.071 kb on + strand, within MPMX26_02525at 2613.071 kb on + strand, within MPMX26_02525at 2613.071 kb on + strand, within MPMX26_02525at 2613.071 kb on + strand, within MPMX26_02525at 2613.071 kb on - strand, within MPMX26_02525at 2613.079 kb on - strand, within MPMX26_02525at 2613.079 kb on - strand, within MPMX26_02525at 2613.079 kb on - strand, within MPMX26_02525at 2613.079 kb on - strand, within MPMX26_02525at 2613.091 kb on - strand, within MPMX26_02525at 2613.124 kb on + strand, within MPMX26_02525at 2613.194 kb on - strand, within MPMX26_02525at 2613.194 kb on - strand, within MPMX26_02525at 2613.204 kb on + strand, within MPMX26_02525at 2613.218 kb on + strand, within MPMX26_02525at 2613.229 kb on + strand, within MPMX26_02525at 2613.229 kb on + strand, within MPMX26_02525at 2613.231 kb on - strand, within MPMX26_02525at 2613.231 kb on - strand, within MPMX26_02525at 2613.231 kb on - strand, within MPMX26_02525at 2613.237 kb on - strand, within MPMX26_02525at 2613.237 kb on - strand, within MPMX26_02525at 2613.237 kb on - strand, within MPMX26_02525at 2613.237 kb on - strand, within MPMX26_02525at 2613.253 kb on + strand, within MPMX26_02525at 2613.253 kb on + strand, within MPMX26_02525at 2613.253 kb on + strand, within MPMX26_02525at 2613.253 kb on + strand, within MPMX26_02525at 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.261 kb on - strandat 2613.342 kb on - strandat 2613.419 kb on + strandat 2613.419 kb on + strandat 2615.379 kb on + strand, within MPMX26_02526at 2615.379 kb on + strand, within MPMX26_02526at 2615.389 kb on + strand, within MPMX26_02526at 2615.493 kb on + strand, within MPMX26_02526at 2615.511 kb on + strand, within MPMX26_02526at 2615.511 kb on + strand, within MPMX26_02526at 2615.594 kb on + strand, within MPMX26_02526at 2615.670 kb on + strandat 2615.741 kb on + strandat 2615.771 kb on + strandat 2615.811 kb on + strandat 2615.844 kb on + strandat 2615.984 kb on + strandat 2615.998 kb on + strand, within MPMX26_02527at 2616.083 kb on + strand, within MPMX26_02527at 2616.099 kb on - strand, within MPMX26_02527at 2616.116 kb on + strand, within MPMX26_02527at 2616.116 kb on + strand, within MPMX26_02527at 2616.116 kb on + strand, within MPMX26_02527at 2616.128 kb on + strand, within MPMX26_02527at 2616.145 kb on + strand, within MPMX26_02527at 2616.153 kb on + strand, within MPMX26_02527at 2616.155 kb on + strand, within MPMX26_02527at 2616.155 kb on + strand, within MPMX26_02527at 2616.161 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.258 kb on + strand, within MPMX26_02527at 2616.258 kb on + strand, within MPMX26_02527at 2616.267 kb on + strand, within MPMX26_02527at 2616.267 kb on + strand, within MPMX26_02527at 2616.276 kb on + strandat 2616.326 kb on + strandat 2616.381 kb on - strandat 2616.381 kb on - strandat 2616.423 kb on - strandat 2616.423 kb on - strandat 2616.428 kb on - strandat 2616.471 kb on - strand, within MPMX26_02528at 2616.492 kb on - strand, within MPMX26_02528at 2616.497 kb on - strand, within MPMX26_02528at 2616.512 kb on - strand, within MPMX26_02528at 2616.516 kb on - strand, within MPMX26_02528at 2616.550 kb on - strand, within MPMX26_02528at 2616.550 kb on - strand, within MPMX26_02528at 2616.609 kb on - strand, within MPMX26_02528at 2616.648 kb on - strand, within MPMX26_02528at 2616.653 kb on - strand, within MPMX26_02528at 2616.653 kb on - strand, within MPMX26_02528at 2616.661 kb on - strand, within MPMX26_02528at 2616.661 kb on - strand, within MPMX26_02528at 2616.703 kb on - strand, within MPMX26_02528at 2616.703 kb on - strand, within MPMX26_02528at 2616.708 kb on - strand, within MPMX26_02528at 2616.748 kb on - strand, within MPMX26_02528

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,612,764 + MPMX26_02525 0.50 +0.3
2,612,772 - MPMX26_02525 0.50 -0.3
2,612,772 - MPMX26_02525 0.50 +0.1
2,612,772 - MPMX26_02525 0.50 -0.3
2,612,782 - MPMX26_02525 0.51 +0.1
2,612,783 + MPMX26_02525 0.51 -0.5
2,612,787 - MPMX26_02525 0.52 +0.4
2,612,850 + MPMX26_02525 0.57 -1.6
2,612,855 + MPMX26_02525 0.57 +0.0
2,612,879 - MPMX26_02525 0.59 +1.0
2,612,990 - MPMX26_02525 0.68 -0.5
2,613,006 + MPMX26_02525 0.69 -1.1
2,613,015 - MPMX26_02525 0.70 -1.2
2,613,015 - MPMX26_02525 0.70 -0.2
2,613,015 - MPMX26_02525 0.70 -0.9
2,613,015 - MPMX26_02525 0.70 -1.5
2,613,017 + MPMX26_02525 0.70 -0.8
2,613,017 + MPMX26_02525 0.70 -0.1
2,613,017 + MPMX26_02525 0.70 -0.4
2,613,017 + MPMX26_02525 0.70 +0.2
2,613,017 + MPMX26_02525 0.70 -0.1
2,613,017 + MPMX26_02525 0.70 +1.4
2,613,020 - MPMX26_02525 0.70 -1.0
2,613,020 - MPMX26_02525 0.70 +0.1
2,613,025 - MPMX26_02525 0.71 -0.2
2,613,025 - MPMX26_02525 0.71 -0.4
2,613,025 - MPMX26_02525 0.71 +0.3
2,613,025 - MPMX26_02525 0.71 -0.3
2,613,025 - MPMX26_02525 0.71 -0.9
2,613,046 + MPMX26_02525 0.73 -0.2
2,613,071 + MPMX26_02525 0.75 +0.1
2,613,071 + MPMX26_02525 0.75 -0.2
2,613,071 + MPMX26_02525 0.75 +1.1
2,613,071 + MPMX26_02525 0.75 -0.6
2,613,071 + MPMX26_02525 0.75 +0.1
2,613,071 - MPMX26_02525 0.75 -0.9
2,613,079 - MPMX26_02525 0.75 -0.8
2,613,079 - MPMX26_02525 0.75 -0.6
2,613,079 - MPMX26_02525 0.75 -1.1
2,613,079 - MPMX26_02525 0.75 +0.4
2,613,091 - MPMX26_02525 0.76 -0.7
2,613,124 + MPMX26_02525 0.79 -1.6
2,613,194 - MPMX26_02525 0.85 -0.9
2,613,194 - MPMX26_02525 0.85 +0.1
2,613,204 + MPMX26_02525 0.85 -0.6
2,613,218 + MPMX26_02525 0.87 +0.8
2,613,229 + MPMX26_02525 0.87 -2.2
2,613,229 + MPMX26_02525 0.87 +0.0
2,613,231 - MPMX26_02525 0.88 -0.3
2,613,231 - MPMX26_02525 0.88 -0.3
2,613,231 - MPMX26_02525 0.88 -0.4
2,613,237 - MPMX26_02525 0.88 -0.7
2,613,237 - MPMX26_02525 0.88 -0.3
2,613,237 - MPMX26_02525 0.88 -1.0
2,613,237 - MPMX26_02525 0.88 -0.8
2,613,253 + MPMX26_02525 0.89 -1.2
2,613,253 + MPMX26_02525 0.89 -0.2
2,613,253 + MPMX26_02525 0.89 +0.9
2,613,253 + MPMX26_02525 0.89 -1.3
2,613,261 - +0.3
2,613,261 - -0.1
2,613,261 - +0.3
2,613,261 - +0.1
2,613,261 - -0.4
2,613,261 - -0.1
2,613,261 - +0.7
2,613,261 - -0.3
2,613,261 - -0.0
2,613,261 - -0.7
2,613,261 - -0.8
2,613,342 - +0.5
2,613,419 + +1.0
2,613,419 + +1.4
2,615,379 + MPMX26_02526 0.79 +0.4
2,615,379 + MPMX26_02526 0.79 -0.8
2,615,389 + MPMX26_02526 0.80 -0.2
2,615,493 + MPMX26_02526 0.85 +0.2
2,615,511 + MPMX26_02526 0.85 -1.1
2,615,511 + MPMX26_02526 0.85 -0.4
2,615,594 + MPMX26_02526 0.90 -1.2
2,615,670 + -0.4
2,615,741 + -0.0
2,615,771 + +0.4
2,615,811 + -0.5
2,615,844 + -0.3
2,615,984 + +0.5
2,615,998 + MPMX26_02527 0.12 -0.6
2,616,083 + MPMX26_02527 0.36 +0.8
2,616,099 - MPMX26_02527 0.41 +0.7
2,616,116 + MPMX26_02527 0.45 -0.1
2,616,116 + MPMX26_02527 0.45 -1.1
2,616,116 + MPMX26_02527 0.45 -0.1
2,616,128 + MPMX26_02527 0.49 -0.2
2,616,145 + MPMX26_02527 0.54 -0.3
2,616,153 + MPMX26_02527 0.56 -0.2
2,616,155 + MPMX26_02527 0.56 -0.3
2,616,155 + MPMX26_02527 0.56 +0.9
2,616,161 + MPMX26_02527 0.58 -0.7
2,616,189 + MPMX26_02527 0.66 -0.1
2,616,189 + MPMX26_02527 0.66 -0.0
2,616,189 + MPMX26_02527 0.66 -0.6
2,616,189 + MPMX26_02527 0.66 +0.1
2,616,189 + MPMX26_02527 0.66 +0.0
2,616,189 + MPMX26_02527 0.66 +0.0
2,616,189 + MPMX26_02527 0.66 +0.8
2,616,189 + MPMX26_02527 0.66 -0.4
2,616,189 + MPMX26_02527 0.66 -0.2
2,616,189 + MPMX26_02527 0.66 +0.2
2,616,189 + MPMX26_02527 0.66 +0.0
2,616,189 + MPMX26_02527 0.66 +0.4
2,616,189 + MPMX26_02527 0.66 +0.4
2,616,189 + MPMX26_02527 0.66 +0.3
2,616,258 + MPMX26_02527 0.85 -0.2
2,616,258 + MPMX26_02527 0.85 -0.5
2,616,267 + MPMX26_02527 0.88 +0.1
2,616,267 + MPMX26_02527 0.88 +0.8
2,616,276 + +0.0
2,616,326 + +0.7
2,616,381 - -0.1
2,616,381 - -0.2
2,616,423 - +0.1
2,616,423 - -0.1
2,616,428 - +0.1
2,616,471 - MPMX26_02528 0.15 -3.5
2,616,492 - MPMX26_02528 0.19 -0.1
2,616,497 - MPMX26_02528 0.19 +0.4
2,616,512 - MPMX26_02528 0.22 +0.5
2,616,516 - MPMX26_02528 0.22 +0.2
2,616,550 - MPMX26_02528 0.28 +0.7
2,616,550 - MPMX26_02528 0.28 +0.2
2,616,609 - MPMX26_02528 0.37 -0.3
2,616,648 - MPMX26_02528 0.44 +0.5
2,616,653 - MPMX26_02528 0.44 -0.4
2,616,653 - MPMX26_02528 0.44 -0.2
2,616,661 - MPMX26_02528 0.46 -0.1
2,616,661 - MPMX26_02528 0.46 -0.3
2,616,703 - MPMX26_02528 0.52 -0.0
2,616,703 - MPMX26_02528 0.52 +0.0
2,616,708 - MPMX26_02528 0.53 -0.0
2,616,748 - MPMX26_02528 0.60 +0.7

Or see this region's nucleotide sequence