Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01868

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01867 and MPMX26_01868 are separated by 25 nucleotidesMPMX26_01868 and MPMX26_01869 are separated by 54 nucleotidesMPMX26_01869 and MPMX26_01870 overlap by 4 nucleotides MPMX26_01867: MPMX26_01867 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 1,904,191 to 1,906,857 _01867 MPMX26_01868: MPMX26_01868 - LL-diaminopimelate aminotransferase, at 1,906,883 to 1,908,052 _01868 MPMX26_01869: MPMX26_01869 - Glutathione peroxidase BsaA, at 1,908,107 to 1,908,589 _01869 MPMX26_01870: MPMX26_01870 - Peptide methionine sulfoxide reductase MsrB, at 1,908,586 to 1,909,005 _01870 Position (kb) 1906 1907 1908 1909Strain fitness (log2 ratio) -3 -2 -1 0 1at 1905.918 kb on + strand, within MPMX26_01867at 1905.924 kb on + strand, within MPMX26_01867at 1905.924 kb on + strand, within MPMX26_01867at 1905.991 kb on + strand, within MPMX26_01867at 1906.903 kb on + strandat 1906.909 kb on + strandat 1906.909 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.981 kb on + strandat 1906.985 kb on + strandat 1906.993 kb on + strandat 1907.050 kb on + strand, within MPMX26_01868at 1907.060 kb on + strand, within MPMX26_01868at 1907.070 kb on + strand, within MPMX26_01868at 1907.074 kb on + strand, within MPMX26_01868at 1907.075 kb on + strand, within MPMX26_01868at 1907.090 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.095 kb on + strand, within MPMX26_01868at 1907.198 kb on + strand, within MPMX26_01868at 1907.198 kb on + strand, within MPMX26_01868at 1907.203 kb on + strand, within MPMX26_01868at 1907.221 kb on + strand, within MPMX26_01868at 1907.222 kb on + strand, within MPMX26_01868at 1907.231 kb on + strand, within MPMX26_01868at 1907.270 kb on + strand, within MPMX26_01868at 1907.278 kb on + strand, within MPMX26_01868at 1907.294 kb on + strand, within MPMX26_01868at 1907.294 kb on + strand, within MPMX26_01868at 1907.297 kb on + strand, within MPMX26_01868at 1907.335 kb on + strand, within MPMX26_01868at 1907.348 kb on + strand, within MPMX26_01868at 1907.386 kb on + strand, within MPMX26_01868at 1907.401 kb on + strand, within MPMX26_01868at 1907.425 kb on + strand, within MPMX26_01868at 1907.425 kb on + strand, within MPMX26_01868at 1907.489 kb on + strand, within MPMX26_01868at 1907.494 kb on + strand, within MPMX26_01868at 1907.494 kb on + strand, within MPMX26_01868at 1907.525 kb on + strand, within MPMX26_01868at 1907.531 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.537 kb on + strand, within MPMX26_01868at 1907.547 kb on + strand, within MPMX26_01868at 1907.585 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.659 kb on + strand, within MPMX26_01868at 1907.689 kb on + strand, within MPMX26_01868at 1907.699 kb on + strand, within MPMX26_01868at 1907.699 kb on + strand, within MPMX26_01868at 1907.744 kb on + strand, within MPMX26_01868at 1907.914 kb on + strand, within MPMX26_01868at 1907.924 kb on + strand, within MPMX26_01868at 1907.926 kb on + strand, within MPMX26_01868at 1907.926 kb on + strand, within MPMX26_01868at 1907.954 kb on + strandat 1907.954 kb on + strandat 1907.954 kb on + strandat 1907.959 kb on + strandat 1907.959 kb on + strandat 1907.959 kb on + strandat 1908.034 kb on + strandat 1908.122 kb on - strandat 1908.152 kb on - strandat 1908.152 kb on - strandat 1908.152 kb on - strandat 1908.181 kb on - strand, within MPMX26_01869at 1908.181 kb on - strand, within MPMX26_01869at 1908.284 kb on - strand, within MPMX26_01869at 1908.413 kb on - strand, within MPMX26_01869at 1908.415 kb on - strand, within MPMX26_01869at 1908.415 kb on - strand, within MPMX26_01869at 1908.415 kb on - strand, within MPMX26_01869at 1908.415 kb on - strand, within MPMX26_01869at 1908.430 kb on - strand, within MPMX26_01869at 1908.437 kb on - strand, within MPMX26_01869at 1908.503 kb on - strand, within MPMX26_01869at 1908.572 kb on - strandat 1908.572 kb on - strandat 1908.572 kb on - strandat 1908.670 kb on - strand, within MPMX26_01870at 1908.702 kb on - strand, within MPMX26_01870at 1908.702 kb on - strand, within MPMX26_01870at 1908.702 kb on - strand, within MPMX26_01870at 1908.739 kb on - strand, within MPMX26_01870at 1908.756 kb on - strand, within MPMX26_01870at 1908.868 kb on + strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.876 kb on - strand, within MPMX26_01870at 1908.877 kb on - strand, within MPMX26_01870at 1908.878 kb on - strand, within MPMX26_01870at 1908.878 kb on - strand, within MPMX26_01870at 1908.883 kb on - strand, within MPMX26_01870at 1908.883 kb on - strand, within MPMX26_01870at 1908.883 kb on - strand, within MPMX26_01870at 1908.900 kb on - strand, within MPMX26_01870at 1908.949 kb on - strand, within MPMX26_01870

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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1,905,918 + MPMX26_01867 0.65 -1.2
1,905,924 + MPMX26_01867 0.65 -1.0
1,905,924 + MPMX26_01867 0.65 -2.4
1,905,991 + MPMX26_01867 0.67 -0.3
1,906,903 + +0.3
1,906,909 + +1.1
1,906,909 + +0.2
1,906,981 + +0.6
1,906,981 + -0.8
1,906,981 + +0.2
1,906,981 + +0.4
1,906,981 + +0.3
1,906,981 + +1.3
1,906,985 + +0.7
1,906,993 + +0.8
1,907,050 + MPMX26_01868 0.14 -0.6
1,907,060 + MPMX26_01868 0.15 -0.1
1,907,070 + MPMX26_01868 0.16 -0.2
1,907,074 + MPMX26_01868 0.16 -0.4
1,907,075 + MPMX26_01868 0.16 +0.7
1,907,090 + MPMX26_01868 0.18 -0.1
1,907,095 + MPMX26_01868 0.18 -0.1
1,907,095 + MPMX26_01868 0.18 -0.0
1,907,095 + MPMX26_01868 0.18 -0.1
1,907,095 + MPMX26_01868 0.18 -1.3
1,907,198 + MPMX26_01868 0.27 +0.1
1,907,198 + MPMX26_01868 0.27 -0.4
1,907,203 + MPMX26_01868 0.27 -0.6
1,907,221 + MPMX26_01868 0.29 +0.4
1,907,222 + MPMX26_01868 0.29 +0.1
1,907,231 + MPMX26_01868 0.30 -0.3
1,907,270 + MPMX26_01868 0.33 -0.2
1,907,278 + MPMX26_01868 0.34 +0.1
1,907,294 + MPMX26_01868 0.35 -0.7
1,907,294 + MPMX26_01868 0.35 -0.7
1,907,297 + MPMX26_01868 0.35 +0.0
1,907,335 + MPMX26_01868 0.39 -1.8
1,907,348 + MPMX26_01868 0.40 -1.2
1,907,386 + MPMX26_01868 0.43 -0.1
1,907,401 + MPMX26_01868 0.44 +0.4
1,907,425 + MPMX26_01868 0.46 +0.4
1,907,425 + MPMX26_01868 0.46 -0.3
1,907,489 + MPMX26_01868 0.52 -0.4
1,907,494 + MPMX26_01868 0.52 +0.2
1,907,494 + MPMX26_01868 0.52 -0.5
1,907,525 + MPMX26_01868 0.55 +0.6
1,907,531 + MPMX26_01868 0.55 +0.3
1,907,537 + MPMX26_01868 0.56 +0.2
1,907,537 + MPMX26_01868 0.56 +1.4
1,907,537 + MPMX26_01868 0.56 +0.6
1,907,537 + MPMX26_01868 0.56 -0.5
1,907,537 + MPMX26_01868 0.56 -0.4
1,907,547 + MPMX26_01868 0.57 +1.2
1,907,585 + MPMX26_01868 0.60 +0.0
1,907,659 + MPMX26_01868 0.66 +0.1
1,907,659 + MPMX26_01868 0.66 +0.1
1,907,659 + MPMX26_01868 0.66 -0.6
1,907,659 + MPMX26_01868 0.66 +0.3
1,907,659 + MPMX26_01868 0.66 -0.0
1,907,659 + MPMX26_01868 0.66 +0.3
1,907,659 + MPMX26_01868 0.66 -0.6
1,907,659 + MPMX26_01868 0.66 -0.1
1,907,659 + MPMX26_01868 0.66 -0.4
1,907,659 + MPMX26_01868 0.66 -0.4
1,907,659 + MPMX26_01868 0.66 -1.2
1,907,659 + MPMX26_01868 0.66 -1.2
1,907,659 + MPMX26_01868 0.66 +0.0
1,907,689 + MPMX26_01868 0.69 +0.5
1,907,699 + MPMX26_01868 0.70 -0.9
1,907,699 + MPMX26_01868 0.70 +0.2
1,907,744 + MPMX26_01868 0.74 +0.3
1,907,914 + MPMX26_01868 0.88 -0.5
1,907,924 + MPMX26_01868 0.89 -0.3
1,907,926 + MPMX26_01868 0.89 -1.2
1,907,926 + MPMX26_01868 0.89 -0.0
1,907,954 + -0.2
1,907,954 + -1.1
1,907,954 + +0.3
1,907,959 + +0.1
1,907,959 + -0.5
1,907,959 + +0.4
1,908,034 + -0.2
1,908,122 - -2.7
1,908,152 - -1.5
1,908,152 - +0.9
1,908,152 - -0.9
1,908,181 - MPMX26_01869 0.15 -1.7
1,908,181 - MPMX26_01869 0.15 -3.0
1,908,284 - MPMX26_01869 0.37 -0.4
1,908,413 - MPMX26_01869 0.63 -2.4
1,908,415 - MPMX26_01869 0.64 -1.3
1,908,415 - MPMX26_01869 0.64 -0.4
1,908,415 - MPMX26_01869 0.64 -0.9
1,908,415 - MPMX26_01869 0.64 -0.7
1,908,430 - MPMX26_01869 0.67 -0.7
1,908,437 - MPMX26_01869 0.68 -3.0
1,908,503 - MPMX26_01869 0.82 +0.4
1,908,572 - -2.0
1,908,572 - -2.3
1,908,572 - -2.7
1,908,670 - MPMX26_01870 0.20 -0.4
1,908,702 - MPMX26_01870 0.28 -1.5
1,908,702 - MPMX26_01870 0.28 -2.8
1,908,702 - MPMX26_01870 0.28 -0.8
1,908,739 - MPMX26_01870 0.36 +0.1
1,908,756 - MPMX26_01870 0.40 +0.3
1,908,868 + MPMX26_01870 0.67 -0.3
1,908,876 - MPMX26_01870 0.69 -0.9
1,908,876 - MPMX26_01870 0.69 -0.3
1,908,876 - MPMX26_01870 0.69 -1.9
1,908,876 - MPMX26_01870 0.69 -1.0
1,908,876 - MPMX26_01870 0.69 +0.6
1,908,876 - MPMX26_01870 0.69 -0.4
1,908,876 - MPMX26_01870 0.69 -0.5
1,908,876 - MPMX26_01870 0.69 -0.6
1,908,876 - MPMX26_01870 0.69 -1.8
1,908,876 - MPMX26_01870 0.69 -1.8
1,908,876 - MPMX26_01870 0.69 -1.8
1,908,876 - MPMX26_01870 0.69 -1.9
1,908,876 - MPMX26_01870 0.69 -0.4
1,908,877 - MPMX26_01870 0.69 -0.9
1,908,878 - MPMX26_01870 0.70 +0.3
1,908,878 - MPMX26_01870 0.70 -0.6
1,908,883 - MPMX26_01870 0.71 -1.3
1,908,883 - MPMX26_01870 0.71 -1.1
1,908,883 - MPMX26_01870 0.71 -0.2
1,908,900 - MPMX26_01870 0.75 -1.0
1,908,949 - MPMX26_01870 0.86 -0.5

Or see this region's nucleotide sequence