Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01767

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01766 and MPMX26_01767 are separated by 4 nucleotidesMPMX26_01767 and MPMX26_01768 are separated by 153 nucleotides MPMX26_01766: MPMX26_01766 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,825,602 to 1,826,570 _01766 MPMX26_01767: MPMX26_01767 - hypothetical protein, at 1,826,575 to 1,827,765 _01767 MPMX26_01768: MPMX26_01768 - Long-chain-aldehyde dehydrogenase, at 1,827,919 to 1,829,430 _01768 Position (kb) 1826 1827 1828Strain fitness (log2 ratio) -1 0 1at 1827.192 kb on + strand, within MPMX26_01767at 1827.210 kb on - strand, within MPMX26_01767at 1827.273 kb on - strand, within MPMX26_01767at 1828.015 kb on + strandat 1828.234 kb on - strand, within MPMX26_01768at 1828.236 kb on + strand, within MPMX26_01768at 1828.539 kb on + strand, within MPMX26_01768

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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1,827,192 + MPMX26_01767 0.52 -0.5
1,827,210 - MPMX26_01767 0.53 -1.1
1,827,273 - MPMX26_01767 0.59 -1.1
1,828,015 + -0.3
1,828,234 - MPMX26_01768 0.21 +0.8
1,828,236 + MPMX26_01768 0.21 -0.3
1,828,539 + MPMX26_01768 0.41 -0.6

Or see this region's nucleotide sequence