Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01196 and MPMX26_01197 overlap by 16 nucleotides MPMX26_01197 and MPMX26_01198 are separated by 9 nucleotides MPMX26_01198 and MPMX26_01199 are separated by 300 nucleotides
MPMX26_01196: MPMX26_01196 - Petrobactin import system permease protein YclO, at 1,269,883 to 1,270,845
_01196
MPMX26_01197: MPMX26_01197 - Petrobactin import ATP-binding protein YclP, at 1,270,830 to 1,271,594
_01197
MPMX26_01198: MPMX26_01198 - Petrobactin-binding protein YclQ, at 1,271,604 to 1,272,551
_01198
MPMX26_01199: MPMX26_01199 - Inner membrane transport protein YdhP, at 1,272,852 to 1,274,060
_01199
Position (kb)
1271
1272
1273 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1272.643 kb on - strand at 1272.643 kb on - strand at 1272.643 kb on - strand at 1272.643 kb on - strand at 1272.643 kb on - strand at 1272.643 kb on - strand at 1272.648 kb on - strand at 1272.650 kb on - strand at 1272.650 kb on - strand at 1272.655 kb on - strand at 1272.655 kb on - strand at 1272.655 kb on - strand at 1272.655 kb on - strand at 1272.669 kb on - strand at 1272.671 kb on - strand at 1272.681 kb on - strand at 1272.681 kb on - strand at 1272.681 kb on - strand at 1272.681 kb on - strand at 1272.681 kb on - strand at 1272.692 kb on - strand at 1272.968 kb on - strand at 1272.975 kb on - strand, within MPMX26_01199 at 1272.982 kb on - strand, within MPMX26_01199 at 1272.996 kb on - strand, within MPMX26_01199 at 1273.040 kb on - strand, within MPMX26_01199 at 1273.058 kb on - strand, within MPMX26_01199 at 1273.058 kb on - strand, within MPMX26_01199 at 1273.059 kb on - strand, within MPMX26_01199 at 1273.077 kb on - strand, within MPMX26_01199 at 1273.112 kb on - strand, within MPMX26_01199 at 1273.152 kb on - strand, within MPMX26_01199 at 1273.155 kb on - strand, within MPMX26_01199 at 1273.155 kb on - strand, within MPMX26_01199 at 1273.157 kb on - strand, within MPMX26_01199 at 1273.157 kb on - strand, within MPMX26_01199 at 1273.157 kb on - strand, within MPMX26_01199 at 1273.157 kb on - strand, within MPMX26_01199 at 1273.176 kb on - strand, within MPMX26_01199 at 1273.181 kb on - strand, within MPMX26_01199 at 1273.193 kb on - strand, within MPMX26_01199 at 1273.208 kb on - strand, within MPMX26_01199 at 1273.271 kb on - strand, within MPMX26_01199 at 1273.272 kb on - strand, within MPMX26_01199 at 1273.277 kb on - strand, within MPMX26_01199 at 1273.334 kb on - strand, within MPMX26_01199 at 1273.334 kb on - strand, within MPMX26_01199 at 1273.334 kb on - strand, within MPMX26_01199 at 1273.416 kb on - strand, within MPMX26_01199 at 1273.442 kb on - strand, within MPMX26_01199 at 1273.452 kb on - strand, within MPMX26_01199 at 1273.496 kb on - strand, within MPMX26_01199 at 1273.496 kb on - strand, within MPMX26_01199
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 1,272,643 - +0.7 1,272,643 - -0.4 1,272,643 - -0.5 1,272,643 - -0.7 1,272,643 - +0.1 1,272,643 - +0.5 1,272,648 - -0.7 1,272,650 - -0.0 1,272,650 - +0.1 1,272,655 - -0.3 1,272,655 - +0.2 1,272,655 - +0.7 1,272,655 - -0.1 1,272,669 - +0.2 1,272,671 - -0.8 1,272,681 - +0.1 1,272,681 - -0.8 1,272,681 - +0.0 1,272,681 - +0.5 1,272,681 - +0.5 1,272,692 - -0.1 1,272,968 - -0.7 1,272,975 - MPMX26_01199 0.10 +0.4 1,272,982 - MPMX26_01199 0.11 +0.3 1,272,996 - MPMX26_01199 0.12 -1.0 1,273,040 - MPMX26_01199 0.16 +0.2 1,273,058 - MPMX26_01199 0.17 +0.0 1,273,058 - MPMX26_01199 0.17 +0.1 1,273,059 - MPMX26_01199 0.17 -1.3 1,273,077 - MPMX26_01199 0.19 +0.5 1,273,112 - MPMX26_01199 0.22 -0.1 1,273,152 - MPMX26_01199 0.25 -3.1 1,273,155 - MPMX26_01199 0.25 -0.1 1,273,155 - MPMX26_01199 0.25 +0.4 1,273,157 - MPMX26_01199 0.25 +1.1 1,273,157 - MPMX26_01199 0.25 +0.0 1,273,157 - MPMX26_01199 0.25 -0.3 1,273,157 - MPMX26_01199 0.25 -1.0 1,273,176 - MPMX26_01199 0.27 +0.6 1,273,181 - MPMX26_01199 0.27 +0.6 1,273,193 - MPMX26_01199 0.28 +0.0 1,273,208 - MPMX26_01199 0.29 +0.0 1,273,271 - MPMX26_01199 0.35 +1.4 1,273,272 - MPMX26_01199 0.35 -1.0 1,273,277 - MPMX26_01199 0.35 -0.8 1,273,334 - MPMX26_01199 0.40 -2.0 1,273,334 - MPMX26_01199 0.40 +0.0 1,273,334 - MPMX26_01199 0.40 -0.1 1,273,416 - MPMX26_01199 0.47 +0.2 1,273,442 - MPMX26_01199 0.49 -0.3 1,273,452 - MPMX26_01199 0.50 +0.3 1,273,496 - MPMX26_01199 0.53 +0.5 1,273,496 - MPMX26_01199 0.53 -1.5
Or see this region's nucleotide sequence