Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5622

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,640,686	-		GFF5621	0.54	-0.7
2,640,734	-		GFF5621	0.58	-0.2
2,640,734	-		GFF5621	0.58	+1.0
2,640,757	+		GFF5621	0.60	-0.5
2,641,239	-				+0.2
2,641,239	-				+0.1
2,641,559	+		GFF5622	0.36	-0.7
2,641,560	-		GFF5622	0.37	-0.7
2,642,114	+				-0.5
2,642,747	+		GFF5623	0.86	+0.6
2,642,747	+		GFF5623	0.86	-0.6
2,643,012	+		GFF5624	0.15	+0.1