Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5526

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,529,722	-		GFF5524	0.68	+0.0
2,529,722	-		GFF5524	0.68	-0.9
2,529,760	+		GFF5524	0.72	-0.1
2,529,760	+		GFF5524	0.72	-0.1
2,529,760	+		GFF5524	0.72	-1.0
2,529,761	-		GFF5524	0.72	+1.4
2,529,761	-		GFF5524	0.72	-0.1
2,529,761	-		GFF5524	0.72	-1.1
2,530,045	+				+0.7
2,530,045	+				-0.0
2,530,046	-				+0.8
2,530,803	+		GFF5526	0.13	+0.7
2,531,034	+		GFF5526	0.31	-0.0
2,531,119	-		GFF5526	0.37	+0.3
2,531,214	+		GFF5526	0.45	+0.7
2,531,214	+		GFF5526	0.45	+0.1
2,531,214	+		GFF5526	0.45	+0.3
2,531,214	+		GFF5526	0.45	+0.8
2,531,215	-		GFF5526	0.45	+1.0
2,531,215	-		GFF5526	0.45	-0.1
2,531,215	-		GFF5526	0.45	+0.6
2,531,340	+		GFF5526	0.54	+1.5
2,531,444	+		GFF5526	0.62	+0.4
2,531,445	-		GFF5526	0.62	-0.5
2,531,613	+		GFF5526	0.75	-0.6
2,531,614	-		GFF5526	0.76	+0.4
2,532,088	+		GFF5527	0.14	+0.5
2,532,353	-		GFF5527	0.34	-1.4
2,532,454	+		GFF5527	0.41	+0.8
2,532,455	-		GFF5527	0.41	+0.2