Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5266

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,279,391	+		GFF5265	0.32	+1.1
2,279,391	+		GFF5265	0.32	+2.0
2,279,392	-		GFF5265	0.32	+0.9
2,279,392	-		GFF5265	0.32	+0.6
2,279,466	+		GFF5265	0.43	+0.9
2,279,467	-		GFF5265	0.43	+1.4
2,279,824	+				+0.2
2,279,824	+				+0.3
2,279,832	+				+0.3
2,279,832	+				-0.1
2,279,833	-				+0.5
2,280,088	-		GFF5266	0.12	+0.2
2,280,088	-		GFF5266	0.12	-1.9
2,280,307	-		GFF5266	0.28	-0.1
2,280,307	-		GFF5266	0.28	+0.5
2,280,798	+		GFF5266	0.62	-0.6
2,280,807	+		GFF5266	0.62	-0.3
2,281,167	+		GFF5266	0.87	+0.6
2,281,705	+				-0.3
2,281,705	+				+1.5
2,281,705	+				-0.0
2,281,705	+				-0.3
2,281,705	+				-0.5
2,281,705	+				+0.4
2,281,706	-				+0.0
2,281,947	+		GFF5268	0.24	+0.1
2,281,947	+		GFF5268	0.24	-0.3
2,281,947	+		GFF5268	0.24	-0.3
2,281,948	-		GFF5268	0.24	+0.9
2,282,085	+		GFF5268	0.41	+0.0
2,282,085	+		GFF5268	0.41	+0.5
2,282,086	-		GFF5268	0.41	+0.4
2,282,127	+		GFF5268	0.47	+0.1
2,282,127	+		GFF5268	0.47	+0.5