Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5042

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,054,256	-		GFF5041	0.48	-0.0
2,054,367	-		GFF5041	0.57	-0.3
2,054,381	+		GFF5041	0.58	-0.1
2,054,408	+		GFF5041	0.60	-2.1
2,054,634	-		GFF5041	0.77	-0.1
2,054,922	+				+0.1
2,055,310	-		GFF5042	0.82	-0.9
2,055,539	-		GFF5043	0.12	-0.3
2,055,539	-		GFF5043	0.12	-0.2
2,056,009	+		GFF5043	0.49	-0.3
2,056,009	+		GFF5043	0.49	+0.2
2,056,112	-		GFF5043	0.57	-0.1
2,056,130	-		GFF5043	0.58	+0.9