Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4323

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
1,250,721	-		GFF4322	0.17	+1.7
1,251,068	+		GFF4322	0.51	-3.0
1,251,068	+		GFF4322	0.51	+0.8
1,251,218	+		GFF4322	0.66	+1.5
1,251,218	+		GFF4322	0.66	-0.6
1,251,218	+		GFF4322	0.66	+0.5
1,251,218	+		GFF4322	0.66	+0.1
1,251,219	-		GFF4322	0.66	+0.2
1,251,219	-		GFF4322	0.66	+0.1
1,251,219	-		GFF4322	0.66	-0.3
1,251,219	-		GFF4322	0.66	-0.6
1,251,219	-		GFF4322	0.66	-1.2
1,251,353	+		GFF4322	0.80	-1.2
1,251,353	+		GFF4322	0.80	+0.2
1,251,353	+		GFF4322	0.80	-0.7
1,251,758	+		GFF4323	0.22	-0.0
1,251,758	+		GFF4323	0.22	+0.9
1,251,758	+		GFF4323	0.22	-0.2
1,251,758	+		GFF4323	0.22	-0.1
1,251,759	-		GFF4323	0.22	+1.0
1,251,759	-		GFF4323	0.22	+0.8
1,251,995	+		GFF4323	0.48	+0.0
1,252,287	-		GFF4323	0.79	+0.4
1,252,379	+		GFF4323	0.89	-0.4
1,252,379	+		GFF4323	0.89	-0.0
1,252,379	+		GFF4323	0.89	-0.6
1,252,379	+		GFF4323	0.89	+0.1
1,252,379	+		GFF4323	0.89	+0.5
1,252,379	+		GFF4323	0.89	+0.3
1,252,379	+		GFF4323	0.89	+0.3
1,252,380	-		GFF4323	0.89	+0.4
1,252,380	-		GFF4323	0.89	+0.7
1,252,380	-		GFF4323	0.89	-0.2
1,252,984	+		GFF4324	0.35	-0.0
1,253,020	+		GFF4324	0.38	-0.8
1,253,020	+		GFF4324	0.38	+0.0
1,253,020	+		GFF4324	0.38	-0.3
1,253,021	-		GFF4324	0.38	+0.3
1,253,177	-		GFF4324	0.51	-0.4
1,253,369	-		GFF4324	0.68	+0.0
1,253,369	-		GFF4324	0.68	-0.8