Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3241

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
122,473	-		GFF3240	0.21	-0.2
122,492	-		GFF3240	0.23	-1.1
122,492	-		GFF3240	0.23	-1.6
122,492	-		GFF3240	0.23	+0.1
122,538	+		GFF3240	0.27	+1.1
122,556	+		GFF3240	0.29	-0.5
122,557	-		GFF3240	0.29	+0.6
122,971	-		GFF3240	0.68	-0.0
123,031	-		GFF3240	0.73	+0.3
123,031	-		GFF3240	0.73	-0.4
123,393	-		GFF3241	0.29	+0.4
123,455	+		GFF3241	0.51	+0.7
123,476	+		GFF3241	0.59	+0.6
123,520	-		GFF3241	0.75	-0.2
123,763	-				+1.1
123,913	-				-0.1
123,974	+				+0.2
124,172	+				-0.6
124,172	+				+0.4
124,173	-				+0.6
124,173	-				+0.2
124,298	+				-0.0
124,299	-				+0.5
124,373	+				+0.3
124,512	-				+0.0