Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3070

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
149,547	+		GFF3069	0.32	-1.0
149,547	+		GFF3069	0.32	-0.3
149,548	-		GFF3069	0.32	-0.2
149,548	-		GFF3069	0.32	+0.2
149,548	-		GFF3069	0.32	+0.1
149,580	+		GFF3069	0.35	+0.4
149,580	+		GFF3069	0.35	+0.4
149,580	+		GFF3069	0.35	+0.2
149,733	+		GFF3069	0.46	-0.2
149,734	-		GFF3069	0.46	-0.2
150,262	+		GFF3069	0.86	-0.7
150,285	+		GFF3069	0.88	+0.1
150,609	-		GFF3070	0.37	+0.4
150,881	-				+0.1
151,122	+		GFF3071	0.22	-0.2
151,122	+		GFF3071	0.22	+0.0
151,123	-		GFF3071	0.22	-0.8
151,123	-		GFF3071	0.22	+0.1
151,123	-		GFF3071	0.22	+1.5
151,308	+		GFF3071	0.39	-0.6
151,308	+		GFF3071	0.39	-0.3
151,309	-		GFF3071	0.39	-0.1
151,309	-		GFF3071	0.39	+0.3
151,309	-		GFF3071	0.39	+0.5
151,452	+		GFF3071	0.52	-1.0
151,453	-		GFF3071	0.52	+0.7
151,554	+		GFF3071	0.61	+0.1
151,554	+		GFF3071	0.61	+0.4
151,554	+		GFF3071	0.61	+0.8
151,555	-		GFF3071	0.61	-0.0
151,689	+		GFF3071	0.73	+0.0
151,689	+		GFF3071	0.73	-0.5
151,690	-		GFF3071	0.73	-1.5
151,690	-		GFF3071	0.73	+0.5
151,713	+		GFF3071	0.75	-0.3
151,713	+		GFF3071	0.75	-0.7
151,713	+		GFF3071	0.75	+0.3
151,714	-		GFF3071	0.75	-1.0
151,714	-		GFF3071	0.75	-0.2
151,714	-		GFF3071	0.75	-1.5
151,857	+		GFF3071	0.88	+0.7
151,857	+		GFF3071	0.88	+0.7
151,857	+		GFF3071	0.88	+0.3
151,858	-		GFF3071	0.88	+0.3
151,858	-		GFF3071	0.88	+0.2