Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02592

Experiment: Lentilan from mushroom 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02590 and BACOVA_02591 overlap by 4 nucleotidesBACOVA_02591 and BACOVA_02592 are separated by 121 nucleotidesBACOVA_02592 and BACOVA_02593 are separated by 67 nucleotides BACOVA_02590: BACOVA_02590 - aspartate--tRNA ligase, at 360,253 to 362,088 _02590 BACOVA_02591: BACOVA_02591 - GtrA-like protein, at 362,085 to 362,474 _02591 BACOVA_02592: BACOVA_02592 - hydrolase, carbon-nitrogen family, at 362,596 to 363,480 _02592 BACOVA_02593: BACOVA_02593 - hypothetical protein, at 363,548 to 364,669 _02593 Position (kb) 362 363 364Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 362.104 kb on + strandat 362.116 kb on + strandat 362.196 kb on + strand, within BACOVA_02591at 362.210 kb on + strand, within BACOVA_02591at 362.212 kb on + strand, within BACOVA_02591at 362.212 kb on + strand, within BACOVA_02591at 362.220 kb on + strand, within BACOVA_02591at 362.220 kb on + strand, within BACOVA_02591at 362.227 kb on + strand, within BACOVA_02591at 362.246 kb on + strand, within BACOVA_02591at 362.291 kb on + strand, within BACOVA_02591at 362.312 kb on - strand, within BACOVA_02591at 362.341 kb on - strand, within BACOVA_02591at 362.374 kb on + strand, within BACOVA_02591at 362.428 kb on - strand, within BACOVA_02591at 362.446 kb on + strandat 362.481 kb on + strandat 362.482 kb on - strandat 362.493 kb on + strandat 362.495 kb on + strandat 362.495 kb on + strandat 362.561 kb on + strandat 362.617 kb on - strandat 362.617 kb on - strandat 362.627 kb on + strandat 362.628 kb on - strandat 362.695 kb on + strand, within BACOVA_02592at 362.828 kb on - strand, within BACOVA_02592at 362.963 kb on - strand, within BACOVA_02592at 362.981 kb on - strand, within BACOVA_02592at 363.025 kb on + strand, within BACOVA_02592at 363.025 kb on + strand, within BACOVA_02592at 363.026 kb on - strand, within BACOVA_02592at 363.028 kb on + strand, within BACOVA_02592at 363.028 kb on + strand, within BACOVA_02592at 363.029 kb on - strand, within BACOVA_02592at 363.029 kb on - strand, within BACOVA_02592at 363.032 kb on - strand, within BACOVA_02592at 363.092 kb on + strand, within BACOVA_02592at 363.092 kb on + strand, within BACOVA_02592at 363.092 kb on + strand, within BACOVA_02592at 363.104 kb on + strand, within BACOVA_02592at 363.235 kb on + strand, within BACOVA_02592at 363.241 kb on - strand, within BACOVA_02592at 363.244 kb on - strand, within BACOVA_02592at 363.264 kb on - strand, within BACOVA_02592at 363.335 kb on + strand, within BACOVA_02592at 363.399 kb on + strandat 363.430 kb on + strandat 363.488 kb on - strandat 363.492 kb on - strandat 363.562 kb on + strandat 363.613 kb on + strandat 363.671 kb on + strand, within BACOVA_02593at 363.672 kb on - strand, within BACOVA_02593at 363.706 kb on - strand, within BACOVA_02593at 363.708 kb on + strand, within BACOVA_02593at 363.882 kb on + strand, within BACOVA_02593at 363.970 kb on + strand, within BACOVA_02593at 363.970 kb on + strand, within BACOVA_02593at 363.999 kb on - strand, within BACOVA_02593at 364.038 kb on + strand, within BACOVA_02593at 364.114 kb on + strand, within BACOVA_02593at 364.114 kb on + strand, within BACOVA_02593at 364.151 kb on + strand, within BACOVA_02593at 364.169 kb on + strand, within BACOVA_02593at 364.169 kb on + strand, within BACOVA_02593at 364.169 kb on + strand, within BACOVA_02593at 364.170 kb on - strand, within BACOVA_02593at 364.170 kb on - strand, within BACOVA_02593at 364.171 kb on + strand, within BACOVA_02593at 364.200 kb on - strand, within BACOVA_02593at 364.292 kb on - strand, within BACOVA_02593at 364.304 kb on + strand, within BACOVA_02593at 364.305 kb on - strand, within BACOVA_02593at 364.427 kb on + strand, within BACOVA_02593at 364.428 kb on - strand, within BACOVA_02593at 364.459 kb on + strand, within BACOVA_02593at 364.460 kb on - strand, within BACOVA_02593at 364.465 kb on + strand, within BACOVA_02593

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Per-strain Table

Position Strand Gene LocusTag Fraction Lentilan from mushroom 2.5 mg/mL (C)
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362,104 + -0.7
362,116 + +0.1
362,196 + BACOVA_02591 0.28 -0.3
362,210 + BACOVA_02591 0.32 +2.9
362,212 + BACOVA_02591 0.33 +0.0
362,212 + BACOVA_02591 0.33 -0.4
362,220 + BACOVA_02591 0.35 +1.2
362,220 + BACOVA_02591 0.35 +0.2
362,227 + BACOVA_02591 0.36 +0.3
362,246 + BACOVA_02591 0.41 +0.8
362,291 + BACOVA_02591 0.53 -0.5
362,312 - BACOVA_02591 0.58 +1.5
362,341 - BACOVA_02591 0.66 +0.9
362,374 + BACOVA_02591 0.74 +1.0
362,428 - BACOVA_02591 0.88 +0.9
362,446 + +0.3
362,481 + +0.8
362,482 - -0.6
362,493 + -0.0
362,495 + +0.2
362,495 + +1.3
362,561 + -0.1
362,617 - -2.7
362,617 - -0.5
362,627 + -3.0
362,628 - -0.5
362,695 + BACOVA_02592 0.11 -0.4
362,828 - BACOVA_02592 0.26 -1.8
362,963 - BACOVA_02592 0.41 -0.5
362,981 - BACOVA_02592 0.44 -0.6
363,025 + BACOVA_02592 0.48 -0.1
363,025 + BACOVA_02592 0.48 -1.0
363,026 - BACOVA_02592 0.49 -2.9
363,028 + BACOVA_02592 0.49 +1.5
363,028 + BACOVA_02592 0.49 -1.7
363,029 - BACOVA_02592 0.49 -1.6
363,029 - BACOVA_02592 0.49 -1.2
363,032 - BACOVA_02592 0.49 +0.5
363,092 + BACOVA_02592 0.56 -1.8
363,092 + BACOVA_02592 0.56 -1.8
363,092 + BACOVA_02592 0.56 +0.6
363,104 + BACOVA_02592 0.57 +0.5
363,235 + BACOVA_02592 0.72 +0.1
363,241 - BACOVA_02592 0.73 -2.7
363,244 - BACOVA_02592 0.73 -1.4
363,264 - BACOVA_02592 0.75 -0.5
363,335 + BACOVA_02592 0.84 -2.8
363,399 + -2.2
363,430 + -1.6
363,488 - -0.8
363,492 - -1.2
363,562 + -1.0
363,613 + +0.9
363,671 + BACOVA_02593 0.11 -0.4
363,672 - BACOVA_02593 0.11 -1.9
363,706 - BACOVA_02593 0.14 -0.9
363,708 + BACOVA_02593 0.14 -0.2
363,882 + BACOVA_02593 0.30 -1.3
363,970 + BACOVA_02593 0.38 -2.6
363,970 + BACOVA_02593 0.38 -2.8
363,999 - BACOVA_02593 0.40 -0.9
364,038 + BACOVA_02593 0.44 +0.9
364,114 + BACOVA_02593 0.50 -1.3
364,114 + BACOVA_02593 0.50 -1.8
364,151 + BACOVA_02593 0.54 -0.7
364,169 + BACOVA_02593 0.55 -1.7
364,169 + BACOVA_02593 0.55 -1.8
364,169 + BACOVA_02593 0.55 -1.6
364,170 - BACOVA_02593 0.55 -1.6
364,170 - BACOVA_02593 0.55 -2.1
364,171 + BACOVA_02593 0.56 -0.9
364,200 - BACOVA_02593 0.58 -1.5
364,292 - BACOVA_02593 0.66 -2.8
364,304 + BACOVA_02593 0.67 -1.1
364,305 - BACOVA_02593 0.67 -0.9
364,427 + BACOVA_02593 0.78 -1.6
364,428 - BACOVA_02593 0.78 -1.3
364,459 + BACOVA_02593 0.81 -0.9
364,460 - BACOVA_02593 0.81 -1.1
364,465 + BACOVA_02593 0.82 -0.6

Or see this region's nucleotide sequence