Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02786

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02784 and MPMX26_02785 are separated by 20 nucleotidesMPMX26_02785 and MPMX26_02786 are separated by 143 nucleotidesMPMX26_02786 and MPMX26_02787 overlap by 38 nucleotidesMPMX26_02787 and MPMX26_02788 overlap by 26 nucleotides MPMX26_02784: MPMX26_02784 - Ribosome maturation factor RimM, at 2,868,094 to 2,868,642 _02784 MPMX26_02785: MPMX26_02785 - 30S ribosomal protein S16, at 2,868,663 to 2,868,920 _02785 MPMX26_02786: MPMX26_02786 - hypothetical protein, at 2,869,064 to 2,869,531 _02786 MPMX26_02787: MPMX26_02787 - hypothetical protein, at 2,869,494 to 2,870,069 _02787 MPMX26_02788: MPMX26_02788 - hypothetical protein, at 2,870,044 to 2,873,964 _02788 Position (kb) 2869 2870Strain fitness (log2 ratio) -1 0 1at 2868.115 kb on - strandat 2868.646 kb on - strandat 2868.646 kb on - strandat 2868.651 kb on - strandat 2869.085 kb on - strandat 2869.094 kb on - strandat 2869.094 kb on - strandat 2869.113 kb on - strand, within MPMX26_02786at 2869.169 kb on - strand, within MPMX26_02786at 2869.176 kb on - strand, within MPMX26_02786at 2869.186 kb on - strand, within MPMX26_02786at 2869.218 kb on - strand, within MPMX26_02786at 2869.226 kb on - strand, within MPMX26_02786at 2869.228 kb on - strand, within MPMX26_02786at 2869.265 kb on - strand, within MPMX26_02786at 2869.327 kb on - strand, within MPMX26_02786at 2869.327 kb on - strand, within MPMX26_02786at 2869.337 kb on - strand, within MPMX26_02786at 2869.337 kb on - strand, within MPMX26_02786at 2869.338 kb on - strand, within MPMX26_02786at 2869.338 kb on - strand, within MPMX26_02786at 2869.345 kb on - strand, within MPMX26_02786at 2869.371 kb on - strand, within MPMX26_02786at 2869.427 kb on - strand, within MPMX26_02786at 2869.468 kb on - strand, within MPMX26_02786at 2869.493 kb on - strandat 2869.493 kb on - strandat 2869.493 kb on - strandat 2869.518 kb on - strandat 2869.566 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.568 kb on - strand, within MPMX26_02787at 2869.573 kb on - strand, within MPMX26_02787at 2869.573 kb on - strand, within MPMX26_02787at 2869.575 kb on - strand, within MPMX26_02787at 2869.578 kb on - strand, within MPMX26_02787at 2869.578 kb on - strand, within MPMX26_02787at 2869.612 kb on - strand, within MPMX26_02787at 2869.620 kb on - strand, within MPMX26_02787at 2869.620 kb on - strand, within MPMX26_02787at 2869.625 kb on - strand, within MPMX26_02787at 2869.644 kb on - strand, within MPMX26_02787at 2869.644 kb on - strand, within MPMX26_02787at 2869.644 kb on - strand, within MPMX26_02787at 2869.649 kb on - strand, within MPMX26_02787at 2869.674 kb on - strand, within MPMX26_02787at 2869.674 kb on - strand, within MPMX26_02787at 2869.719 kb on - strand, within MPMX26_02787at 2869.740 kb on - strand, within MPMX26_02787at 2869.752 kb on - strand, within MPMX26_02787at 2869.752 kb on - strand, within MPMX26_02787at 2869.752 kb on - strand, within MPMX26_02787at 2869.752 kb on - strand, within MPMX26_02787at 2869.752 kb on - strand, within MPMX26_02787at 2869.757 kb on - strand, within MPMX26_02787at 2869.823 kb on - strand, within MPMX26_02787at 2869.860 kb on - strand, within MPMX26_02787at 2869.860 kb on - strand, within MPMX26_02787at 2869.899 kb on - strand, within MPMX26_02787at 2869.899 kb on - strand, within MPMX26_02787at 2869.899 kb on - strand, within MPMX26_02787at 2869.899 kb on - strand, within MPMX26_02787at 2869.930 kb on - strand, within MPMX26_02787at 2869.985 kb on - strand, within MPMX26_02787at 2869.993 kb on - strand, within MPMX26_02787at 2870.000 kb on - strand, within MPMX26_02787at 2870.001 kb on - strand, within MPMX26_02787at 2870.001 kb on - strand, within MPMX26_02787at 2870.001 kb on - strand, within MPMX26_02787at 2870.029 kb on - strandat 2870.036 kb on - strandat 2870.083 kb on - strandat 2870.095 kb on - strandat 2870.124 kb on - strandat 2870.170 kb on - strandat 2870.171 kb on - strandat 2870.226 kb on - strandat 2870.301 kb on - strandat 2870.309 kb on - strandat 2870.316 kb on - strandat 2870.330 kb on - strandat 2870.335 kb on - strandat 2870.352 kb on - strandat 2870.443 kb on - strand, within MPMX26_02788at 2870.443 kb on - strand, within MPMX26_02788at 2870.443 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.448 kb on - strand, within MPMX26_02788at 2870.458 kb on - strand, within MPMX26_02788at 2870.458 kb on - strand, within MPMX26_02788at 2870.458 kb on - strand, within MPMX26_02788at 2870.491 kb on - strand, within MPMX26_02788

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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2,868,115 - -1.5
2,868,646 - +0.5
2,868,646 - -0.1
2,868,651 - +1.5
2,869,085 - +0.5
2,869,094 - +0.4
2,869,094 - +0.0
2,869,113 - MPMX26_02786 0.10 +0.1
2,869,169 - MPMX26_02786 0.22 +0.1
2,869,176 - MPMX26_02786 0.24 +0.6
2,869,186 - MPMX26_02786 0.26 +0.4
2,869,218 - MPMX26_02786 0.33 +0.8
2,869,226 - MPMX26_02786 0.35 -0.1
2,869,228 - MPMX26_02786 0.35 +0.2
2,869,265 - MPMX26_02786 0.43 -0.1
2,869,327 - MPMX26_02786 0.56 +0.3
2,869,327 - MPMX26_02786 0.56 +0.5
2,869,337 - MPMX26_02786 0.58 +0.9
2,869,337 - MPMX26_02786 0.58 +0.5
2,869,338 - MPMX26_02786 0.59 +0.7
2,869,338 - MPMX26_02786 0.59 +0.5
2,869,345 - MPMX26_02786 0.60 +0.7
2,869,371 - MPMX26_02786 0.66 +0.2
2,869,427 - MPMX26_02786 0.78 +0.6
2,869,468 - MPMX26_02786 0.86 +0.2
2,869,493 - +0.2
2,869,493 - -0.4
2,869,493 - +0.3
2,869,518 - +0.6
2,869,566 - MPMX26_02787 0.12 -0.3
2,869,568 - MPMX26_02787 0.13 +0.4
2,869,568 - MPMX26_02787 0.13 -0.7
2,869,568 - MPMX26_02787 0.13 +0.2
2,869,568 - MPMX26_02787 0.13 +0.6
2,869,568 - MPMX26_02787 0.13 -0.2
2,869,568 - MPMX26_02787 0.13 +0.5
2,869,573 - MPMX26_02787 0.14 +0.8
2,869,573 - MPMX26_02787 0.14 +1.2
2,869,575 - MPMX26_02787 0.14 +0.6
2,869,578 - MPMX26_02787 0.15 +0.3
2,869,578 - MPMX26_02787 0.15 +0.6
2,869,612 - MPMX26_02787 0.20 -0.3
2,869,620 - MPMX26_02787 0.22 +0.6
2,869,620 - MPMX26_02787 0.22 +0.3
2,869,625 - MPMX26_02787 0.23 +0.4
2,869,644 - MPMX26_02787 0.26 +0.6
2,869,644 - MPMX26_02787 0.26 +0.6
2,869,644 - MPMX26_02787 0.26 +0.5
2,869,649 - MPMX26_02787 0.27 +1.7
2,869,674 - MPMX26_02787 0.31 +0.5
2,869,674 - MPMX26_02787 0.31 +0.1
2,869,719 - MPMX26_02787 0.39 +0.6
2,869,740 - MPMX26_02787 0.43 +0.4
2,869,752 - MPMX26_02787 0.45 -0.4
2,869,752 - MPMX26_02787 0.45 +0.8
2,869,752 - MPMX26_02787 0.45 +0.7
2,869,752 - MPMX26_02787 0.45 +0.3
2,869,752 - MPMX26_02787 0.45 +1.0
2,869,757 - MPMX26_02787 0.46 +1.0
2,869,823 - MPMX26_02787 0.57 +0.6
2,869,860 - MPMX26_02787 0.64 +0.4
2,869,860 - MPMX26_02787 0.64 +0.5
2,869,899 - MPMX26_02787 0.70 +0.5
2,869,899 - MPMX26_02787 0.70 +0.5
2,869,899 - MPMX26_02787 0.70 +0.9
2,869,899 - MPMX26_02787 0.70 +0.5
2,869,930 - MPMX26_02787 0.76 +0.6
2,869,985 - MPMX26_02787 0.85 +0.6
2,869,993 - MPMX26_02787 0.87 +0.2
2,870,000 - MPMX26_02787 0.88 +0.1
2,870,001 - MPMX26_02787 0.88 +0.3
2,870,001 - MPMX26_02787 0.88 +0.1
2,870,001 - MPMX26_02787 0.88 +0.7
2,870,029 - +0.5
2,870,036 - +0.1
2,870,083 - +0.5
2,870,095 - +0.5
2,870,124 - +0.8
2,870,170 - +0.4
2,870,171 - +0.6
2,870,226 - +0.5
2,870,301 - +0.6
2,870,309 - +0.8
2,870,316 - +0.6
2,870,330 - +0.8
2,870,335 - +0.8
2,870,352 - +0.9
2,870,443 - MPMX26_02788 0.10 +0.8
2,870,443 - MPMX26_02788 0.10 +0.2
2,870,443 - MPMX26_02788 0.10 +1.1
2,870,448 - MPMX26_02788 0.10 +0.1
2,870,448 - MPMX26_02788 0.10 +0.7
2,870,448 - MPMX26_02788 0.10 +0.4
2,870,448 - MPMX26_02788 0.10 +0.1
2,870,448 - MPMX26_02788 0.10 +0.6
2,870,448 - MPMX26_02788 0.10 +0.7
2,870,448 - MPMX26_02788 0.10 +0.7
2,870,448 - MPMX26_02788 0.10 +0.7
2,870,448 - MPMX26_02788 0.10 +0.6
2,870,448 - MPMX26_02788 0.10 +0.4
2,870,448 - MPMX26_02788 0.10 +0.9
2,870,448 - MPMX26_02788 0.10 +0.7
2,870,448 - MPMX26_02788 0.10 +1.0
2,870,448 - MPMX26_02788 0.10 +0.8
2,870,458 - MPMX26_02788 0.11 +0.7
2,870,458 - MPMX26_02788 0.11 +0.9
2,870,458 - MPMX26_02788 0.11 +0.3
2,870,491 - MPMX26_02788 0.11 +0.4

Or see this region's nucleotide sequence