Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02677 and MPMX26_02678 are separated by 37 nucleotides MPMX26_02678 and MPMX26_02679 are separated by 154 nucleotides MPMX26_02679 and MPMX26_02680 are separated by 77 nucleotides MPMX26_02680 and MPMX26_02681 are separated by 234 nucleotides MPMX26_02681 and MPMX26_02682 are separated by 74 nucleotides MPMX26_02682 and MPMX26_02683 are separated by 14 nucleotides MPMX26_02683 and MPMX26_02684 are separated by 231 nucleotides
MPMX26_02677: MPMX26_02677 - putative protein YcgM, at 2,772,683 to 2,773,321
_02677
MPMX26_02678: MPMX26_02678 - hypothetical protein, at 2,773,359 to 2,773,856
_02678
MPMX26_02679: MPMX26_02679 - hypothetical protein, at 2,774,011 to 2,775,318
_02679
MPMX26_02680: MPMX26_02680 - tRNA-Arg, at 2,775,396 to 2,775,472
_02680
MPMX26_02681: MPMX26_02681 - tRNA-Arg, at 2,775,707 to 2,775,783
_02681
MPMX26_02682: MPMX26_02682 - tRNA-Arg, at 2,775,858 to 2,775,934
_02682
MPMX26_02683: MPMX26_02683 - tRNA-Ser, at 2,775,949 to 2,776,038
_02683
MPMX26_02684: MPMX26_02684 - Ribonuclease R, at 2,776,270 to 2,778,714
_02684
Position (kb)
2774
2775
2776 Strain fitness (log2 ratio)
-2
-1
0
1 at 2773.015 kb on - strand, within MPMX26_02677 at 2773.021 kb on - strand, within MPMX26_02677 at 2773.021 kb on - strand, within MPMX26_02677 at 2773.022 kb on - strand, within MPMX26_02677 at 2773.056 kb on - strand, within MPMX26_02677 at 2773.144 kb on - strand, within MPMX26_02677 at 2773.155 kb on - strand, within MPMX26_02677 at 2773.155 kb on - strand, within MPMX26_02677 at 2773.197 kb on - strand, within MPMX26_02677 at 2773.216 kb on - strand, within MPMX26_02677 at 2773.236 kb on - strand, within MPMX26_02677 at 2773.236 kb on - strand, within MPMX26_02677 at 2773.246 kb on - strand, within MPMX26_02677 at 2773.246 kb on - strand, within MPMX26_02677 at 2773.246 kb on - strand, within MPMX26_02677 at 2773.246 kb on - strand, within MPMX26_02677 at 2773.250 kb on - strand, within MPMX26_02677 at 2773.250 kb on - strand, within MPMX26_02677 at 2773.261 kb on - strand at 2773.261 kb on - strand at 2773.261 kb on - strand at 2773.261 kb on - strand at 2773.279 kb on - strand at 2773.288 kb on - strand at 2773.433 kb on - strand, within MPMX26_02678 at 2773.490 kb on - strand, within MPMX26_02678 at 2773.490 kb on - strand, within MPMX26_02678 at 2773.490 kb on - strand, within MPMX26_02678 at 2773.498 kb on - strand, within MPMX26_02678 at 2773.538 kb on - strand, within MPMX26_02678 at 2773.540 kb on - strand, within MPMX26_02678 at 2773.540 kb on - strand, within MPMX26_02678 at 2773.540 kb on - strand, within MPMX26_02678 at 2773.540 kb on - strand, within MPMX26_02678 at 2773.540 kb on - strand, within MPMX26_02678 at 2773.545 kb on - strand, within MPMX26_02678 at 2773.561 kb on - strand, within MPMX26_02678 at 2773.587 kb on - strand, within MPMX26_02678 at 2773.608 kb on - strand, within MPMX26_02678 at 2773.638 kb on - strand, within MPMX26_02678 at 2773.705 kb on - strand, within MPMX26_02678 at 2773.729 kb on - strand, within MPMX26_02678 at 2773.729 kb on - strand, within MPMX26_02678 at 2773.737 kb on - strand, within MPMX26_02678 at 2773.739 kb on - strand, within MPMX26_02678 at 2773.742 kb on - strand, within MPMX26_02678 at 2773.742 kb on - strand, within MPMX26_02678 at 2773.753 kb on - strand, within MPMX26_02678 at 2773.819 kb on - strand at 2773.819 kb on - strand at 2773.838 kb on - strand at 2775.168 kb on - strand, within MPMX26_02679 at 2775.385 kb on - strand at 2775.419 kb on - strand, within MPMX26_02680 at 2775.483 kb on - strand at 2775.707 kb on - strand at 2775.707 kb on - strand at 2775.716 kb on - strand, within MPMX26_02681 at 2775.730 kb on - strand, within MPMX26_02681 at 2775.849 kb on - strand at 2775.849 kb on - strand at 2776.251 kb on + strand at 2776.259 kb on - strand at 2776.265 kb on + strand at 2776.278 kb on + strand at 2776.278 kb on + strand at 2776.283 kb on + strand at 2776.291 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,773,015 - MPMX26_02677 0.52 +0.3 2,773,021 - MPMX26_02677 0.53 +0.3 2,773,021 - MPMX26_02677 0.53 +0.2 2,773,022 - MPMX26_02677 0.53 +0.3 2,773,056 - MPMX26_02677 0.58 -0.7 2,773,144 - MPMX26_02677 0.72 +0.1 2,773,155 - MPMX26_02677 0.74 +0.2 2,773,155 - MPMX26_02677 0.74 +0.3 2,773,197 - MPMX26_02677 0.80 -2.7 2,773,216 - MPMX26_02677 0.83 -0.1 2,773,236 - MPMX26_02677 0.87 +0.6 2,773,236 - MPMX26_02677 0.87 -0.2 2,773,246 - MPMX26_02677 0.88 +0.5 2,773,246 - MPMX26_02677 0.88 +0.5 2,773,246 - MPMX26_02677 0.88 +0.1 2,773,246 - MPMX26_02677 0.88 -0.2 2,773,250 - MPMX26_02677 0.89 +0.7 2,773,250 - MPMX26_02677 0.89 +0.4 2,773,261 - -0.0 2,773,261 - -0.3 2,773,261 - +0.2 2,773,261 - -0.2 2,773,279 - -0.0 2,773,288 - -0.4 2,773,433 - MPMX26_02678 0.15 +0.2 2,773,490 - MPMX26_02678 0.26 +0.1 2,773,490 - MPMX26_02678 0.26 -0.1 2,773,490 - MPMX26_02678 0.26 -0.2 2,773,498 - MPMX26_02678 0.28 +1.0 2,773,538 - MPMX26_02678 0.36 +0.4 2,773,540 - MPMX26_02678 0.36 +0.5 2,773,540 - MPMX26_02678 0.36 +0.5 2,773,540 - MPMX26_02678 0.36 +0.4 2,773,540 - MPMX26_02678 0.36 -0.1 2,773,540 - MPMX26_02678 0.36 -1.8 2,773,545 - MPMX26_02678 0.37 +0.0 2,773,561 - MPMX26_02678 0.41 -0.1 2,773,587 - MPMX26_02678 0.46 +0.1 2,773,608 - MPMX26_02678 0.50 -0.1 2,773,638 - MPMX26_02678 0.56 +0.5 2,773,705 - MPMX26_02678 0.69 -0.1 2,773,729 - MPMX26_02678 0.74 -0.5 2,773,729 - MPMX26_02678 0.74 -0.2 2,773,737 - MPMX26_02678 0.76 -0.6 2,773,739 - MPMX26_02678 0.76 -0.5 2,773,742 - MPMX26_02678 0.77 +0.1 2,773,742 - MPMX26_02678 0.77 -0.3 2,773,753 - MPMX26_02678 0.79 -0.3 2,773,819 - +0.1 2,773,819 - -0.1 2,773,838 - -0.5 2,775,168 - MPMX26_02679 0.88 -0.7 2,775,385 - +0.3 2,775,419 - MPMX26_02680 0.30 +0.4 2,775,483 - -0.5 2,775,707 - +0.3 2,775,707 - -0.3 2,775,716 - MPMX26_02681 0.12 +0.2 2,775,730 - MPMX26_02681 0.30 +0.0 2,775,849 - +0.7 2,775,849 - -0.0 2,776,251 + -0.9 2,776,259 - -0.9 2,776,265 + +0.5 2,776,278 + -0.5 2,776,278 + +1.2 2,776,283 + -0.3 2,776,291 - -0.2
Or see this region's nucleotide sequence