Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02542

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02541 and MPMX26_02542 are separated by 284 nucleotidesMPMX26_02542 and MPMX26_02543 are separated by 120 nucleotides MPMX26_02541: MPMX26_02541 - HTH-type transcriptional regulator CysL, at 2,628,209 to 2,629,090 _02541 MPMX26_02542: MPMX26_02542 - Uracil phosphoribosyltransferase, at 2,629,375 to 2,630,010 _02542 MPMX26_02543: MPMX26_02543 - NADH-quinone oxidoreductase subunit N, at 2,630,131 to 2,631,624 _02543 Position (kb) 2629 2630 2631Strain fitness (log2 ratio) -3 -2 -1 0 1at 2628.444 kb on + strand, within MPMX26_02541at 2628.494 kb on + strand, within MPMX26_02541at 2628.553 kb on + strand, within MPMX26_02541at 2628.577 kb on + strand, within MPMX26_02541at 2628.577 kb on + strand, within MPMX26_02541at 2628.586 kb on + strand, within MPMX26_02541at 2628.587 kb on + strand, within MPMX26_02541at 2628.651 kb on + strand, within MPMX26_02541at 2628.678 kb on + strand, within MPMX26_02541at 2628.704 kb on + strand, within MPMX26_02541at 2628.711 kb on + strand, within MPMX26_02541at 2628.729 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.800 kb on + strand, within MPMX26_02541at 2628.841 kb on + strand, within MPMX26_02541at 2628.905 kb on + strand, within MPMX26_02541at 2628.982 kb on + strand, within MPMX26_02541at 2628.989 kb on + strand, within MPMX26_02541at 2629.364 kb on - strandat 2629.420 kb on - strandat 2629.424 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.436 kb on - strandat 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.576 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.622 kb on - strand, within MPMX26_02542at 2629.622 kb on - strand, within MPMX26_02542at 2629.635 kb on - strand, within MPMX26_02542at 2629.670 kb on - strand, within MPMX26_02542at 2629.691 kb on - strand, within MPMX26_02542at 2629.691 kb on - strand, within MPMX26_02542at 2629.712 kb on - strand, within MPMX26_02542at 2629.712 kb on - strand, within MPMX26_02542at 2629.719 kb on - strand, within MPMX26_02542at 2629.824 kb on - strand, within MPMX26_02542at 2629.840 kb on - strand, within MPMX26_02542at 2629.841 kb on - strand, within MPMX26_02542at 2629.970 kb on - strandat 2630.013 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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2,628,444 + MPMX26_02541 0.27 -1.1
2,628,494 + MPMX26_02541 0.32 -0.7
2,628,553 + MPMX26_02541 0.39 -2.6
2,628,577 + MPMX26_02541 0.42 -0.9
2,628,577 + MPMX26_02541 0.42 -3.2
2,628,586 + MPMX26_02541 0.43 -1.4
2,628,587 + MPMX26_02541 0.43 -2.0
2,628,651 + MPMX26_02541 0.50 -2.4
2,628,678 + MPMX26_02541 0.53 -1.6
2,628,704 + MPMX26_02541 0.56 -1.4
2,628,711 + MPMX26_02541 0.57 -0.4
2,628,729 + MPMX26_02541 0.59 -0.7
2,628,739 + MPMX26_02541 0.60 -2.8
2,628,739 + MPMX26_02541 0.60 -0.9
2,628,739 + MPMX26_02541 0.60 -2.3
2,628,739 + MPMX26_02541 0.60 -0.9
2,628,800 + MPMX26_02541 0.67 -2.0
2,628,841 + MPMX26_02541 0.72 -2.9
2,628,905 + MPMX26_02541 0.79 -1.1
2,628,982 + MPMX26_02541 0.88 -2.3
2,628,989 + MPMX26_02541 0.88 -0.7
2,629,364 - -0.1
2,629,420 - -0.4
2,629,424 - -0.7
2,629,425 - -0.4
2,629,425 - +0.0
2,629,425 - +0.1
2,629,425 - -0.5
2,629,425 - +0.2
2,629,425 - -0.2
2,629,425 - -0.4
2,629,425 - +0.0
2,629,425 - +0.3
2,629,436 - +0.2
2,629,441 - MPMX26_02542 0.10 -0.2
2,629,441 - MPMX26_02542 0.10 -0.3
2,629,441 - MPMX26_02542 0.10 +0.6
2,629,441 - MPMX26_02542 0.10 +0.2
2,629,441 - MPMX26_02542 0.10 -0.2
2,629,441 - MPMX26_02542 0.10 -0.4
2,629,441 - MPMX26_02542 0.10 -0.1
2,629,441 - MPMX26_02542 0.10 +0.1
2,629,441 - MPMX26_02542 0.10 +0.1
2,629,441 - MPMX26_02542 0.10 +0.3
2,629,441 - MPMX26_02542 0.10 +0.5
2,629,441 - MPMX26_02542 0.10 +0.1
2,629,441 - MPMX26_02542 0.10 -0.4
2,629,576 - MPMX26_02542 0.32 +0.4
2,629,612 - MPMX26_02542 0.37 +0.4
2,629,612 - MPMX26_02542 0.37 +0.0
2,629,612 - MPMX26_02542 0.37 -0.0
2,629,612 - MPMX26_02542 0.37 +0.2
2,629,612 - MPMX26_02542 0.37 +0.0
2,629,622 - MPMX26_02542 0.39 +0.4
2,629,622 - MPMX26_02542 0.39 -0.2
2,629,635 - MPMX26_02542 0.41 -0.1
2,629,670 - MPMX26_02542 0.46 +0.1
2,629,691 - MPMX26_02542 0.50 +0.1
2,629,691 - MPMX26_02542 0.50 +0.2
2,629,712 - MPMX26_02542 0.53 -0.7
2,629,712 - MPMX26_02542 0.53 +0.1
2,629,719 - MPMX26_02542 0.54 +0.1
2,629,824 - MPMX26_02542 0.71 +0.2
2,629,840 - MPMX26_02542 0.73 -0.2
2,629,841 - MPMX26_02542 0.73 +0.0
2,629,970 - -0.4
2,630,013 - -0.3

Or see this region's nucleotide sequence