Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02541 and MPMX26_02542 are separated by 284 nucleotides MPMX26_02542 and MPMX26_02543 are separated by 120 nucleotides
MPMX26_02541: MPMX26_02541 - HTH-type transcriptional regulator CysL, at 2,628,209 to 2,629,090
_02541
MPMX26_02542: MPMX26_02542 - Uracil phosphoribosyltransferase, at 2,629,375 to 2,630,010
_02542
MPMX26_02543: MPMX26_02543 - NADH-quinone oxidoreductase subunit N, at 2,630,131 to 2,631,624
_02543
Position (kb)
2629
2630
2631 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2628.444 kb on + strand, within MPMX26_02541 at 2628.494 kb on + strand, within MPMX26_02541 at 2628.553 kb on + strand, within MPMX26_02541 at 2628.577 kb on + strand, within MPMX26_02541 at 2628.577 kb on + strand, within MPMX26_02541 at 2628.586 kb on + strand, within MPMX26_02541 at 2628.587 kb on + strand, within MPMX26_02541 at 2628.651 kb on + strand, within MPMX26_02541 at 2628.678 kb on + strand, within MPMX26_02541 at 2628.704 kb on + strand, within MPMX26_02541 at 2628.711 kb on + strand, within MPMX26_02541 at 2628.729 kb on + strand, within MPMX26_02541 at 2628.739 kb on + strand, within MPMX26_02541 at 2628.739 kb on + strand, within MPMX26_02541 at 2628.739 kb on + strand, within MPMX26_02541 at 2628.739 kb on + strand, within MPMX26_02541 at 2628.800 kb on + strand, within MPMX26_02541 at 2628.841 kb on + strand, within MPMX26_02541 at 2628.905 kb on + strand, within MPMX26_02541 at 2628.982 kb on + strand, within MPMX26_02541 at 2628.989 kb on + strand, within MPMX26_02541 at 2629.364 kb on - strand at 2629.420 kb on - strand at 2629.424 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.425 kb on - strand at 2629.436 kb on - strand at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.441 kb on - strand, within MPMX26_02542 at 2629.576 kb on - strand, within MPMX26_02542 at 2629.612 kb on - strand, within MPMX26_02542 at 2629.612 kb on - strand, within MPMX26_02542 at 2629.612 kb on - strand, within MPMX26_02542 at 2629.612 kb on - strand, within MPMX26_02542 at 2629.612 kb on - strand, within MPMX26_02542 at 2629.622 kb on - strand, within MPMX26_02542 at 2629.622 kb on - strand, within MPMX26_02542 at 2629.635 kb on - strand, within MPMX26_02542 at 2629.670 kb on - strand, within MPMX26_02542 at 2629.691 kb on - strand, within MPMX26_02542 at 2629.691 kb on - strand, within MPMX26_02542 at 2629.712 kb on - strand, within MPMX26_02542 at 2629.712 kb on - strand, within MPMX26_02542 at 2629.719 kb on - strand, within MPMX26_02542 at 2629.824 kb on - strand, within MPMX26_02542 at 2629.840 kb on - strand, within MPMX26_02542 at 2629.841 kb on - strand, within MPMX26_02542 at 2629.970 kb on - strand at 2630.013 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,628,444 + MPMX26_02541 0.27 -1.1 2,628,494 + MPMX26_02541 0.32 -0.7 2,628,553 + MPMX26_02541 0.39 -2.6 2,628,577 + MPMX26_02541 0.42 -0.9 2,628,577 + MPMX26_02541 0.42 -3.2 2,628,586 + MPMX26_02541 0.43 -1.4 2,628,587 + MPMX26_02541 0.43 -2.0 2,628,651 + MPMX26_02541 0.50 -2.4 2,628,678 + MPMX26_02541 0.53 -1.6 2,628,704 + MPMX26_02541 0.56 -1.4 2,628,711 + MPMX26_02541 0.57 -0.4 2,628,729 + MPMX26_02541 0.59 -0.7 2,628,739 + MPMX26_02541 0.60 -2.8 2,628,739 + MPMX26_02541 0.60 -0.9 2,628,739 + MPMX26_02541 0.60 -2.3 2,628,739 + MPMX26_02541 0.60 -0.9 2,628,800 + MPMX26_02541 0.67 -2.0 2,628,841 + MPMX26_02541 0.72 -2.9 2,628,905 + MPMX26_02541 0.79 -1.1 2,628,982 + MPMX26_02541 0.88 -2.3 2,628,989 + MPMX26_02541 0.88 -0.7 2,629,364 - -0.1 2,629,420 - -0.4 2,629,424 - -0.7 2,629,425 - -0.4 2,629,425 - +0.0 2,629,425 - +0.1 2,629,425 - -0.5 2,629,425 - +0.2 2,629,425 - -0.2 2,629,425 - -0.4 2,629,425 - +0.0 2,629,425 - +0.3 2,629,436 - +0.2 2,629,441 - MPMX26_02542 0.10 -0.2 2,629,441 - MPMX26_02542 0.10 -0.3 2,629,441 - MPMX26_02542 0.10 +0.6 2,629,441 - MPMX26_02542 0.10 +0.2 2,629,441 - MPMX26_02542 0.10 -0.2 2,629,441 - MPMX26_02542 0.10 -0.4 2,629,441 - MPMX26_02542 0.10 -0.1 2,629,441 - MPMX26_02542 0.10 +0.1 2,629,441 - MPMX26_02542 0.10 +0.1 2,629,441 - MPMX26_02542 0.10 +0.3 2,629,441 - MPMX26_02542 0.10 +0.5 2,629,441 - MPMX26_02542 0.10 +0.1 2,629,441 - MPMX26_02542 0.10 -0.4 2,629,576 - MPMX26_02542 0.32 +0.4 2,629,612 - MPMX26_02542 0.37 +0.4 2,629,612 - MPMX26_02542 0.37 +0.0 2,629,612 - MPMX26_02542 0.37 -0.0 2,629,612 - MPMX26_02542 0.37 +0.2 2,629,612 - MPMX26_02542 0.37 +0.0 2,629,622 - MPMX26_02542 0.39 +0.4 2,629,622 - MPMX26_02542 0.39 -0.2 2,629,635 - MPMX26_02542 0.41 -0.1 2,629,670 - MPMX26_02542 0.46 +0.1 2,629,691 - MPMX26_02542 0.50 +0.1 2,629,691 - MPMX26_02542 0.50 +0.2 2,629,712 - MPMX26_02542 0.53 -0.7 2,629,712 - MPMX26_02542 0.53 +0.1 2,629,719 - MPMX26_02542 0.54 +0.1 2,629,824 - MPMX26_02542 0.71 +0.2 2,629,840 - MPMX26_02542 0.73 -0.2 2,629,841 - MPMX26_02542 0.73 +0.0 2,629,970 - -0.4 2,630,013 - -0.3
Or see this region's nucleotide sequence