Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02294

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02292 and MPMX26_02293 are separated by 253 nucleotidesMPMX26_02293 and MPMX26_02294 are separated by 222 nucleotidesMPMX26_02294 and MPMX26_02295 are separated by 114 nucleotides MPMX26_02292: MPMX26_02292 - putative membrane transporter protein YfcA, at 2,361,830 to 2,362,591 _02292 MPMX26_02293: MPMX26_02293 - hypothetical protein, at 2,362,845 to 2,363,204 _02293 MPMX26_02294: MPMX26_02294 - Alkane 1-monooxygenase, at 2,363,427 to 2,364,632 _02294 MPMX26_02295: MPMX26_02295 - putative HTH-type transcriptional regulator, at 2,364,747 to 2,365,775 _02295 Position (kb) 2363 2364 2365Strain fitness (log2 ratio) -1 0 1at 2362.878 kb on + strandat 2362.955 kb on + strand, within MPMX26_02293at 2362.988 kb on + strand, within MPMX26_02293at 2363.021 kb on + strand, within MPMX26_02293at 2363.633 kb on + strand, within MPMX26_02294at 2363.878 kb on + strand, within MPMX26_02294

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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2,362,878 + -1.5
2,362,955 + MPMX26_02293 0.31 +0.2
2,362,988 + MPMX26_02293 0.40 -0.2
2,363,021 + MPMX26_02293 0.49 -0.7
2,363,633 + MPMX26_02294 0.17 -0.3
2,363,878 + MPMX26_02294 0.37 -0.2

Or see this region's nucleotide sequence