Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01989 and MPMX26_01990 are separated by 345 nucleotides MPMX26_01990 and MPMX26_01991 are separated by 140 nucleotides
MPMX26_01989: MPMX26_01989 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 2,046,814 to 2,048,220
_01989
MPMX26_01990: MPMX26_01990 - p-hydroxyphenylacetate 3-hydroxylase, reductase component, at 2,048,566 to 2,049,501
_01990
MPMX26_01991: MPMX26_01991 - Glutarate-semialdehyde dehydrogenase, at 2,049,642 to 2,051,090
_01991
Position (kb)
2048
2049
2050 Strain fitness (log2 ratio)
-1
0
1 at 2047.939 kb on + strand, within MPMX26_01989 at 2048.916 kb on - strand, within MPMX26_01990 at 2048.916 kb on - strand, within MPMX26_01990 at 2048.916 kb on - strand, within MPMX26_01990 at 2048.916 kb on - strand, within MPMX26_01990 at 2048.940 kb on - strand, within MPMX26_01990 at 2048.980 kb on - strand, within MPMX26_01990 at 2049.048 kb on - strand, within MPMX26_01990 at 2049.099 kb on - strand, within MPMX26_01990 at 2049.100 kb on - strand, within MPMX26_01990 at 2049.139 kb on - strand, within MPMX26_01990 at 2049.141 kb on - strand, within MPMX26_01990 at 2049.141 kb on - strand, within MPMX26_01990 at 2049.141 kb on - strand, within MPMX26_01990 at 2049.378 kb on - strand, within MPMX26_01990 at 2049.678 kb on - strand at 2049.716 kb on - strand at 2049.716 kb on - strand at 2049.716 kb on - strand at 2049.780 kb on - strand at 2049.816 kb on - strand, within MPMX26_01991 at 2049.891 kb on - strand, within MPMX26_01991 at 2049.930 kb on - strand, within MPMX26_01991 at 2049.938 kb on - strand, within MPMX26_01991 at 2049.938 kb on - strand, within MPMX26_01991 at 2049.939 kb on - strand, within MPMX26_01991 at 2049.977 kb on - strand, within MPMX26_01991 at 2050.029 kb on - strand, within MPMX26_01991 at 2050.029 kb on - strand, within MPMX26_01991 at 2050.047 kb on - strand, within MPMX26_01991 at 2050.047 kb on - strand, within MPMX26_01991 at 2050.112 kb on - strand, within MPMX26_01991 at 2050.225 kb on - strand, within MPMX26_01991 at 2050.230 kb on - strand, within MPMX26_01991 at 2050.235 kb on - strand, within MPMX26_01991 at 2050.235 kb on - strand, within MPMX26_01991 at 2050.235 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.281 kb on - strand, within MPMX26_01991 at 2050.286 kb on - strand, within MPMX26_01991 at 2050.286 kb on - strand, within MPMX26_01991 at 2050.356 kb on - strand, within MPMX26_01991 at 2050.421 kb on - strand, within MPMX26_01991 at 2050.452 kb on - strand, within MPMX26_01991 at 2050.464 kb on - strand, within MPMX26_01991 at 2050.464 kb on - strand, within MPMX26_01991 at 2050.464 kb on - strand, within MPMX26_01991 at 2050.481 kb on - strand, within MPMX26_01991
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,047,939 + MPMX26_01989 0.80 -0.7 2,048,916 - MPMX26_01990 0.37 -0.7 2,048,916 - MPMX26_01990 0.37 -0.1 2,048,916 - MPMX26_01990 0.37 -0.7 2,048,916 - MPMX26_01990 0.37 +1.1 2,048,940 - MPMX26_01990 0.40 +0.7 2,048,980 - MPMX26_01990 0.44 +1.2 2,049,048 - MPMX26_01990 0.51 +0.7 2,049,099 - MPMX26_01990 0.57 +0.0 2,049,100 - MPMX26_01990 0.57 +0.0 2,049,139 - MPMX26_01990 0.61 -0.1 2,049,141 - MPMX26_01990 0.61 -1.1 2,049,141 - MPMX26_01990 0.61 -0.1 2,049,141 - MPMX26_01990 0.61 -0.2 2,049,378 - MPMX26_01990 0.87 +0.2 2,049,678 - -0.0 2,049,716 - -0.4 2,049,716 - +0.6 2,049,716 - +0.4 2,049,780 - +0.9 2,049,816 - MPMX26_01991 0.12 -0.1 2,049,891 - MPMX26_01991 0.17 +0.1 2,049,930 - MPMX26_01991 0.20 +0.4 2,049,938 - MPMX26_01991 0.20 -0.2 2,049,938 - MPMX26_01991 0.20 +0.2 2,049,939 - MPMX26_01991 0.20 +0.1 2,049,977 - MPMX26_01991 0.23 +0.1 2,050,029 - MPMX26_01991 0.27 -0.1 2,050,029 - MPMX26_01991 0.27 -0.0 2,050,047 - MPMX26_01991 0.28 -0.1 2,050,047 - MPMX26_01991 0.28 +0.0 2,050,112 - MPMX26_01991 0.32 +0.5 2,050,225 - MPMX26_01991 0.40 +0.4 2,050,230 - MPMX26_01991 0.41 +0.4 2,050,235 - MPMX26_01991 0.41 -0.0 2,050,235 - MPMX26_01991 0.41 -0.6 2,050,235 - MPMX26_01991 0.41 -0.5 2,050,281 - MPMX26_01991 0.44 +0.0 2,050,281 - MPMX26_01991 0.44 +0.1 2,050,281 - MPMX26_01991 0.44 +0.7 2,050,281 - MPMX26_01991 0.44 +0.3 2,050,281 - MPMX26_01991 0.44 -0.1 2,050,281 - MPMX26_01991 0.44 -0.1 2,050,286 - MPMX26_01991 0.44 -0.6 2,050,286 - MPMX26_01991 0.44 -0.1 2,050,356 - MPMX26_01991 0.49 -0.0 2,050,421 - MPMX26_01991 0.54 -0.2 2,050,452 - MPMX26_01991 0.56 +0.4 2,050,464 - MPMX26_01991 0.57 -0.4 2,050,464 - MPMX26_01991 0.57 -0.8 2,050,464 - MPMX26_01991 0.57 +0.9 2,050,481 - MPMX26_01991 0.58 -0.1
Or see this region's nucleotide sequence