Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01643

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01642 and MPMX26_01643 are separated by 311 nucleotidesMPMX26_01643 and MPMX26_01644 are separated by 13 nucleotidesMPMX26_01644 and MPMX26_01645 are separated by 27 nucleotides MPMX26_01642: MPMX26_01642 - Ribonuclease D, at 1,702,007 to 1,703,149 _01642 MPMX26_01643: MPMX26_01643 - Recombination protein RecR, at 1,703,461 to 1,704,057 _01643 MPMX26_01644: MPMX26_01644 - Nucleoid-associated protein YbaB, at 1,704,071 to 1,704,400 _01644 MPMX26_01645: MPMX26_01645 - O-succinylhomoserine sulfhydrylase, at 1,704,428 to 1,705,615 _01645 Position (kb) 1703 1704 1705Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1702.478 kb on - strand, within MPMX26_01642at 1702.478 kb on - strand, within MPMX26_01642at 1702.478 kb on - strand, within MPMX26_01642at 1702.505 kb on - strand, within MPMX26_01642at 1702.505 kb on - strand, within MPMX26_01642at 1702.559 kb on - strand, within MPMX26_01642at 1702.573 kb on - strand, within MPMX26_01642at 1702.573 kb on - strand, within MPMX26_01642at 1702.610 kb on - strand, within MPMX26_01642at 1702.610 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.661 kb on - strand, within MPMX26_01642at 1702.661 kb on - strand, within MPMX26_01642at 1702.690 kb on - strand, within MPMX26_01642at 1702.690 kb on - strand, within MPMX26_01642at 1702.709 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.750 kb on - strand, within MPMX26_01642at 1702.759 kb on - strand, within MPMX26_01642at 1702.786 kb on - strand, within MPMX26_01642at 1702.819 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1703.018 kb on - strand, within MPMX26_01642at 1703.149 kb on - strandat 1703.490 kb on - strandat 1703.490 kb on - strandat 1703.501 kb on - strandat 1703.507 kb on - strandat 1703.507 kb on - strandat 1703.507 kb on - strandat 1703.514 kb on - strandat 1703.539 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.622 kb on - strand, within MPMX26_01643at 1703.622 kb on - strand, within MPMX26_01643at 1703.629 kb on - strand, within MPMX26_01643at 1703.630 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.694 kb on - strand, within MPMX26_01643at 1703.698 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.713 kb on - strand, within MPMX26_01643at 1703.743 kb on - strand, within MPMX26_01643at 1703.750 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.815 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.857 kb on - strand, within MPMX26_01643at 1703.867 kb on - strand, within MPMX26_01643at 1703.867 kb on - strand, within MPMX26_01643at 1703.882 kb on - strand, within MPMX26_01643at 1703.932 kb on - strand, within MPMX26_01643at 1703.937 kb on - strand, within MPMX26_01643at 1703.942 kb on - strand, within MPMX26_01643at 1703.946 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.064 kb on - strandat 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.203 kb on - strand, within MPMX26_01644at 1704.293 kb on - strand, within MPMX26_01644at 1704.311 kb on - strand, within MPMX26_01644at 1704.322 kb on - strand, within MPMX26_01644at 1704.364 kb on - strand, within MPMX26_01644at 1704.508 kb on - strandat 1704.508 kb on - strandat 1704.508 kb on - strandat 1704.508 kb on - strandat 1704.508 kb on - strandat 1704.536 kb on - strandat 1704.536 kb on - strandat 1704.564 kb on - strand, within MPMX26_01645at 1704.564 kb on - strand, within MPMX26_01645at 1704.733 kb on - strand, within MPMX26_01645at 1704.750 kb on - strand, within MPMX26_01645at 1704.786 kb on - strand, within MPMX26_01645at 1704.804 kb on - strand, within MPMX26_01645at 1704.817 kb on - strand, within MPMX26_01645at 1704.827 kb on - strand, within MPMX26_01645at 1704.840 kb on - strand, within MPMX26_01645at 1704.840 kb on - strand, within MPMX26_01645at 1704.849 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.897 kb on - strand, within MPMX26_01645at 1704.902 kb on - strand, within MPMX26_01645at 1704.944 kb on - strand, within MPMX26_01645at 1704.944 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.951 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.961 kb on - strand, within MPMX26_01645at 1704.968 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1704.973 kb on - strand, within MPMX26_01645at 1705.001 kb on - strand, within MPMX26_01645at 1705.014 kb on - strand, within MPMX26_01645at 1705.039 kb on - strand, within MPMX26_01645

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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1,702,478 - MPMX26_01642 0.41 -0.1
1,702,478 - MPMX26_01642 0.41 -0.0
1,702,478 - MPMX26_01642 0.41 -0.2
1,702,505 - MPMX26_01642 0.44 -0.1
1,702,505 - MPMX26_01642 0.44 +0.1
1,702,559 - MPMX26_01642 0.48 -0.3
1,702,573 - MPMX26_01642 0.50 -0.0
1,702,573 - MPMX26_01642 0.50 -0.3
1,702,610 - MPMX26_01642 0.53 -0.3
1,702,610 - MPMX26_01642 0.53 -0.1
1,702,618 - MPMX26_01642 0.53 -0.0
1,702,618 - MPMX26_01642 0.53 -0.0
1,702,618 - MPMX26_01642 0.53 -0.2
1,702,618 - MPMX26_01642 0.53 -0.3
1,702,618 - MPMX26_01642 0.53 +0.3
1,702,661 - MPMX26_01642 0.57 +0.1
1,702,661 - MPMX26_01642 0.57 -0.4
1,702,690 - MPMX26_01642 0.60 +0.2
1,702,690 - MPMX26_01642 0.60 +0.1
1,702,709 - MPMX26_01642 0.61 +0.0
1,702,714 - MPMX26_01642 0.62 -0.1
1,702,714 - MPMX26_01642 0.62 -0.1
1,702,714 - MPMX26_01642 0.62 -0.1
1,702,750 - MPMX26_01642 0.65 -0.1
1,702,759 - MPMX26_01642 0.66 +0.2
1,702,786 - MPMX26_01642 0.68 -0.2
1,702,819 - MPMX26_01642 0.71 +0.0
1,702,970 - MPMX26_01642 0.84 +0.0
1,702,970 - MPMX26_01642 0.84 -0.1
1,702,970 - MPMX26_01642 0.84 +1.2
1,702,978 - MPMX26_01642 0.85 -0.1
1,702,978 - MPMX26_01642 0.85 -0.6
1,702,978 - MPMX26_01642 0.85 -0.1
1,702,978 - MPMX26_01642 0.85 -0.2
1,702,978 - MPMX26_01642 0.85 -0.3
1,702,978 - MPMX26_01642 0.85 -0.3
1,702,978 - MPMX26_01642 0.85 +0.2
1,703,018 - MPMX26_01642 0.88 -0.2
1,703,149 - -0.1
1,703,490 - +0.2
1,703,490 - -0.4
1,703,501 - +1.0
1,703,507 - +0.2
1,703,507 - -0.0
1,703,507 - +0.0
1,703,514 - +0.5
1,703,539 - MPMX26_01643 0.13 +0.1
1,703,543 - MPMX26_01643 0.14 -0.5
1,703,543 - MPMX26_01643 0.14 +0.4
1,703,543 - MPMX26_01643 0.14 -0.1
1,703,622 - MPMX26_01643 0.27 -0.0
1,703,622 - MPMX26_01643 0.27 +0.0
1,703,629 - MPMX26_01643 0.28 +0.1
1,703,630 - MPMX26_01643 0.28 -0.3
1,703,689 - MPMX26_01643 0.38 -0.2
1,703,689 - MPMX26_01643 0.38 -0.7
1,703,689 - MPMX26_01643 0.38 +0.1
1,703,689 - MPMX26_01643 0.38 -0.1
1,703,689 - MPMX26_01643 0.38 +0.4
1,703,689 - MPMX26_01643 0.38 -0.3
1,703,689 - MPMX26_01643 0.38 -0.2
1,703,694 - MPMX26_01643 0.39 -0.2
1,703,698 - MPMX26_01643 0.40 -0.1
1,703,708 - MPMX26_01643 0.41 -0.4
1,703,708 - MPMX26_01643 0.41 +0.4
1,703,708 - MPMX26_01643 0.41 -0.4
1,703,708 - MPMX26_01643 0.41 +0.3
1,703,708 - MPMX26_01643 0.41 +0.2
1,703,708 - MPMX26_01643 0.41 -0.6
1,703,713 - MPMX26_01643 0.42 +0.2
1,703,743 - MPMX26_01643 0.47 +0.2
1,703,750 - MPMX26_01643 0.48 -0.0
1,703,813 - MPMX26_01643 0.59 -0.2
1,703,813 - MPMX26_01643 0.59 -0.3
1,703,813 - MPMX26_01643 0.59 +0.2
1,703,815 - MPMX26_01643 0.59 +0.1
1,703,818 - MPMX26_01643 0.60 -0.6
1,703,818 - MPMX26_01643 0.60 +0.8
1,703,818 - MPMX26_01643 0.60 +0.0
1,703,818 - MPMX26_01643 0.60 -0.8
1,703,818 - MPMX26_01643 0.60 -0.0
1,703,818 - MPMX26_01643 0.60 +0.3
1,703,818 - MPMX26_01643 0.60 +0.4
1,703,818 - MPMX26_01643 0.60 +0.1
1,703,818 - MPMX26_01643 0.60 +0.1
1,703,818 - MPMX26_01643 0.60 -0.0
1,703,818 - MPMX26_01643 0.60 +0.2
1,703,857 - MPMX26_01643 0.66 +0.2
1,703,867 - MPMX26_01643 0.68 -0.1
1,703,867 - MPMX26_01643 0.68 -1.3
1,703,882 - MPMX26_01643 0.71 +0.2
1,703,932 - MPMX26_01643 0.79 -0.2
1,703,937 - MPMX26_01643 0.80 +0.3
1,703,942 - MPMX26_01643 0.81 -0.2
1,703,946 - MPMX26_01643 0.81 -0.0
1,703,983 - MPMX26_01643 0.87 +0.0
1,703,983 - MPMX26_01643 0.87 -0.0
1,703,983 - MPMX26_01643 0.87 +0.1
1,703,983 - MPMX26_01643 0.87 +0.0
1,703,983 - MPMX26_01643 0.87 +0.1
1,703,983 - MPMX26_01643 0.87 +0.0
1,703,983 - MPMX26_01643 0.87 +0.8
1,703,983 - MPMX26_01643 0.87 +0.4
1,703,983 - MPMX26_01643 0.87 +0.1
1,703,983 - MPMX26_01643 0.87 +0.1
1,703,983 - MPMX26_01643 0.87 -0.4
1,703,983 - MPMX26_01643 0.87 +0.5
1,704,044 - +0.6
1,704,044 - +0.3
1,704,044 - -0.1
1,704,044 - +0.1
1,704,064 - +0.4
1,704,109 - MPMX26_01644 0.12 +0.5
1,704,109 - MPMX26_01644 0.12 -0.1
1,704,109 - MPMX26_01644 0.12 +0.1
1,704,109 - MPMX26_01644 0.12 +0.3
1,704,109 - MPMX26_01644 0.12 +0.3
1,704,203 - MPMX26_01644 0.40 +0.0
1,704,293 - MPMX26_01644 0.67 +0.5
1,704,311 - MPMX26_01644 0.73 -0.1
1,704,322 - MPMX26_01644 0.76 -0.0
1,704,364 - MPMX26_01644 0.89 +0.2
1,704,508 - -4.6
1,704,508 - -4.3
1,704,508 - -4.5
1,704,508 - -6.3
1,704,508 - -5.8
1,704,536 - -3.8
1,704,536 - -4.2
1,704,564 - MPMX26_01645 0.11 -3.9
1,704,564 - MPMX26_01645 0.11 -3.2
1,704,733 - MPMX26_01645 0.26 -5.3
1,704,750 - MPMX26_01645 0.27 -1.7
1,704,786 - MPMX26_01645 0.30 -2.4
1,704,804 - MPMX26_01645 0.32 -2.1
1,704,817 - MPMX26_01645 0.33 -4.4
1,704,827 - MPMX26_01645 0.34 -4.6
1,704,840 - MPMX26_01645 0.35 -1.4
1,704,840 - MPMX26_01645 0.35 -2.0
1,704,849 - MPMX26_01645 0.35 -0.7
1,704,897 - MPMX26_01645 0.39 +0.3
1,704,897 - MPMX26_01645 0.39 -1.4
1,704,897 - MPMX26_01645 0.39 -1.1
1,704,897 - MPMX26_01645 0.39 -3.1
1,704,902 - MPMX26_01645 0.40 -5.9
1,704,944 - MPMX26_01645 0.43 -4.4
1,704,944 - MPMX26_01645 0.43 -5.6
1,704,951 - MPMX26_01645 0.44 -3.5
1,704,951 - MPMX26_01645 0.44 -2.2
1,704,951 - MPMX26_01645 0.44 -1.1
1,704,961 - MPMX26_01645 0.45 -4.8
1,704,961 - MPMX26_01645 0.45 -6.1
1,704,961 - MPMX26_01645 0.45 -5.4
1,704,961 - MPMX26_01645 0.45 -5.3
1,704,961 - MPMX26_01645 0.45 -6.0
1,704,968 - MPMX26_01645 0.45 -3.6
1,704,973 - MPMX26_01645 0.46 -4.5
1,704,973 - MPMX26_01645 0.46 -5.0
1,704,973 - MPMX26_01645 0.46 -5.1
1,704,973 - MPMX26_01645 0.46 -3.5
1,704,973 - MPMX26_01645 0.46 -4.7
1,704,973 - MPMX26_01645 0.46 -6.1
1,705,001 - MPMX26_01645 0.48 -4.8
1,705,014 - MPMX26_01645 0.49 -3.5
1,705,039 - MPMX26_01645 0.51 -5.7

Or see this region's nucleotide sequence