Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01290 and MPMX26_01291 are separated by 62 nucleotides MPMX26_01291 and MPMX26_01292 are separated by 199 nucleotides MPMX26_01292 and MPMX26_01293 overlap by 14 nucleotides
MPMX26_01290: MPMX26_01290 - 2-methylcitrate synthase, at 1,365,432 to 1,366,574
_01290
MPMX26_01291: MPMX26_01291 - hypothetical protein, at 1,366,637 to 1,367,272
_01291
MPMX26_01292: MPMX26_01292 - DNA-binding transcriptional regulator NtrC, at 1,367,472 to 1,368,947
_01292
MPMX26_01293: MPMX26_01293 - Sensory histidine kinase/phosphatase NtrB, at 1,368,934 to 1,370,043
_01293
Position (kb)
1367
1368
1369 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1366.784 kb on - strand, within MPMX26_01291 at 1367.520 kb on - strand at 1367.520 kb on - strand at 1367.520 kb on - strand at 1367.567 kb on - strand at 1367.588 kb on - strand at 1367.639 kb on - strand, within MPMX26_01292 at 1367.705 kb on - strand, within MPMX26_01292 at 1367.711 kb on - strand, within MPMX26_01292 at 1367.768 kb on - strand, within MPMX26_01292 at 1368.059 kb on - strand, within MPMX26_01292 at 1368.156 kb on - strand, within MPMX26_01292 at 1368.183 kb on - strand, within MPMX26_01292 at 1368.183 kb on - strand, within MPMX26_01292 at 1368.255 kb on - strand, within MPMX26_01292 at 1368.255 kb on - strand, within MPMX26_01292 at 1368.255 kb on - strand, within MPMX26_01292 at 1368.255 kb on - strand, within MPMX26_01292 at 1368.276 kb on - strand, within MPMX26_01292 at 1368.276 kb on - strand, within MPMX26_01292 at 1368.365 kb on - strand, within MPMX26_01292 at 1368.428 kb on - strand, within MPMX26_01292 at 1368.428 kb on - strand, within MPMX26_01292 at 1368.438 kb on - strand, within MPMX26_01292 at 1368.473 kb on - strand, within MPMX26_01292 at 1368.548 kb on - strand, within MPMX26_01292 at 1368.606 kb on - strand, within MPMX26_01292 at 1368.617 kb on - strand, within MPMX26_01292 at 1368.623 kb on - strand, within MPMX26_01292 at 1368.635 kb on - strand, within MPMX26_01292 at 1368.642 kb on - strand, within MPMX26_01292 at 1368.711 kb on - strand, within MPMX26_01292 at 1368.735 kb on - strand, within MPMX26_01292 at 1368.735 kb on - strand, within MPMX26_01292 at 1368.735 kb on - strand, within MPMX26_01292 at 1368.735 kb on - strand, within MPMX26_01292 at 1368.743 kb on - strand, within MPMX26_01292 at 1368.743 kb on - strand, within MPMX26_01292 at 1368.828 kb on - strand at 1368.828 kb on - strand at 1368.828 kb on - strand at 1368.828 kb on - strand at 1368.833 kb on - strand at 1368.833 kb on - strand at 1368.833 kb on - strand at 1368.833 kb on - strand at 1368.837 kb on - strand at 1368.843 kb on - strand at 1368.860 kb on - strand at 1368.875 kb on - strand at 1368.963 kb on - strand at 1368.975 kb on - strand at 1369.006 kb on - strand at 1369.024 kb on - strand at 1369.044 kb on - strand at 1369.044 kb on - strand at 1369.056 kb on - strand, within MPMX26_01293 at 1369.056 kb on - strand, within MPMX26_01293 at 1369.056 kb on - strand, within MPMX26_01293 at 1369.062 kb on - strand, within MPMX26_01293 at 1369.089 kb on - strand, within MPMX26_01293 at 1369.206 kb on - strand, within MPMX26_01293 at 1369.311 kb on - strand, within MPMX26_01293 at 1369.347 kb on - strand, within MPMX26_01293 at 1369.407 kb on - strand, within MPMX26_01293 at 1369.416 kb on - strand, within MPMX26_01293 at 1369.613 kb on - strand, within MPMX26_01293 at 1369.813 kb on - strand, within MPMX26_01293 at 1369.813 kb on - strand, within MPMX26_01293 at 1369.932 kb on - strand, within MPMX26_01293
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 1,366,784 - MPMX26_01291 0.23 +0.1 1,367,520 - -1.3 1,367,520 - -2.4 1,367,520 - -1.8 1,367,567 - -4.6 1,367,588 - -0.8 1,367,639 - MPMX26_01292 0.11 -3.5 1,367,705 - MPMX26_01292 0.16 -4.2 1,367,711 - MPMX26_01292 0.16 -4.1 1,367,768 - MPMX26_01292 0.20 -4.4 1,368,059 - MPMX26_01292 0.40 -3.8 1,368,156 - MPMX26_01292 0.46 -2.5 1,368,183 - MPMX26_01292 0.48 -0.8 1,368,183 - MPMX26_01292 0.48 -3.3 1,368,255 - MPMX26_01292 0.53 -2.4 1,368,255 - MPMX26_01292 0.53 -3.2 1,368,255 - MPMX26_01292 0.53 -2.2 1,368,255 - MPMX26_01292 0.53 -2.8 1,368,276 - MPMX26_01292 0.54 -3.1 1,368,276 - MPMX26_01292 0.54 -4.4 1,368,365 - MPMX26_01292 0.61 -3.4 1,368,428 - MPMX26_01292 0.65 -4.3 1,368,428 - MPMX26_01292 0.65 -3.2 1,368,438 - MPMX26_01292 0.65 -2.6 1,368,473 - MPMX26_01292 0.68 -1.5 1,368,548 - MPMX26_01292 0.73 -3.3 1,368,606 - MPMX26_01292 0.77 -2.9 1,368,617 - MPMX26_01292 0.78 -3.4 1,368,623 - MPMX26_01292 0.78 -3.5 1,368,635 - MPMX26_01292 0.79 -4.0 1,368,642 - MPMX26_01292 0.79 -4.2 1,368,711 - MPMX26_01292 0.84 -4.1 1,368,735 - MPMX26_01292 0.86 -1.7 1,368,735 - MPMX26_01292 0.86 -2.2 1,368,735 - MPMX26_01292 0.86 -3.6 1,368,735 - MPMX26_01292 0.86 -2.6 1,368,743 - MPMX26_01292 0.86 -1.9 1,368,743 - MPMX26_01292 0.86 -3.1 1,368,828 - +0.9 1,368,828 - -1.8 1,368,828 - -2.8 1,368,828 - -1.8 1,368,833 - -4.1 1,368,833 - -3.4 1,368,833 - -2.8 1,368,833 - -3.4 1,368,837 - -4.4 1,368,843 - -1.6 1,368,860 - -3.7 1,368,875 - -3.0 1,368,963 - -1.1 1,368,975 - -0.3 1,369,006 - -1.7 1,369,024 - -0.6 1,369,044 - -3.0 1,369,044 - -2.1 1,369,056 - MPMX26_01293 0.11 -1.9 1,369,056 - MPMX26_01293 0.11 -3.9 1,369,056 - MPMX26_01293 0.11 -2.0 1,369,062 - MPMX26_01293 0.12 -3.2 1,369,089 - MPMX26_01293 0.14 -3.3 1,369,206 - MPMX26_01293 0.25 -3.3 1,369,311 - MPMX26_01293 0.34 -1.8 1,369,347 - MPMX26_01293 0.37 -2.4 1,369,407 - MPMX26_01293 0.43 -2.9 1,369,416 - MPMX26_01293 0.43 -2.0 1,369,613 - MPMX26_01293 0.61 -0.7 1,369,813 - MPMX26_01293 0.79 -1.1 1,369,813 - MPMX26_01293 0.79 -2.0 1,369,932 - MPMX26_01293 0.90 -2.0
Or see this region's nucleotide sequence