Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01102 and MPMX26_01103 are separated by 3 nucleotides MPMX26_01103 and MPMX26_01104 are separated by 49 nucleotides MPMX26_01104 and MPMX26_01105 are separated by 37 nucleotides
MPMX26_01102: MPMX26_01102 - hypothetical protein, at 1,175,223 to 1,176,245
_01102
MPMX26_01103: MPMX26_01103 - hypothetical protein, at 1,176,249 to 1,177,115
_01103
MPMX26_01104: MPMX26_01104 - Carboxy-S-adenosyl-L-methionine synthase, at 1,177,165 to 1,177,839
_01104
MPMX26_01105: MPMX26_01105 - tRNA (guanine-N(7)-)-methyltransferase, at 1,177,877 to 1,178,593
_01105
Position (kb)
1176
1177
1178 Strain fitness (log2 ratio)
-1
0
1 at 1175.339 kb on + strand, within MPMX26_01102 at 1175.354 kb on + strand, within MPMX26_01102 at 1175.984 kb on + strand, within MPMX26_01102 at 1176.065 kb on + strand, within MPMX26_01102 at 1176.146 kb on + strand at 1176.177 kb on + strand at 1176.215 kb on + strand at 1176.372 kb on + strand, within MPMX26_01103 at 1176.911 kb on + strand, within MPMX26_01103 at 1177.029 kb on + strand at 1177.829 kb on - strand at 1177.829 kb on - strand at 1177.831 kb on - strand at 1177.851 kb on - strand at 1177.929 kb on - strand at 1177.929 kb on - strand at 1177.929 kb on - strand at 1177.934 kb on - strand at 1177.934 kb on - strand at 1177.969 kb on - strand, within MPMX26_01105 at 1177.969 kb on - strand, within MPMX26_01105 at 1177.969 kb on - strand, within MPMX26_01105 at 1177.969 kb on - strand, within MPMX26_01105 at 1177.990 kb on - strand, within MPMX26_01105 at 1178.003 kb on - strand, within MPMX26_01105 at 1178.026 kb on - strand, within MPMX26_01105 at 1178.026 kb on - strand, within MPMX26_01105 at 1178.034 kb on - strand, within MPMX26_01105 at 1178.041 kb on - strand, within MPMX26_01105 at 1178.046 kb on - strand, within MPMX26_01105 at 1178.065 kb on - strand, within MPMX26_01105 at 1178.065 kb on - strand, within MPMX26_01105 at 1178.065 kb on - strand, within MPMX26_01105 at 1178.084 kb on - strand, within MPMX26_01105 at 1178.094 kb on - strand, within MPMX26_01105 at 1178.115 kb on - strand, within MPMX26_01105
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 1,175,339 + MPMX26_01102 0.11 -0.0 1,175,354 + MPMX26_01102 0.13 -1.2 1,175,984 + MPMX26_01102 0.74 +1.5 1,176,065 + MPMX26_01102 0.82 +0.0 1,176,146 + -1.3 1,176,177 + -1.2 1,176,215 + -0.3 1,176,372 + MPMX26_01103 0.14 +0.0 1,176,911 + MPMX26_01103 0.76 +0.8 1,177,029 + +0.6 1,177,829 - +0.7 1,177,829 - -0.2 1,177,831 - +0.6 1,177,851 - +0.9 1,177,929 - -0.2 1,177,929 - -0.4 1,177,929 - -0.3 1,177,934 - -0.1 1,177,934 - +0.3 1,177,969 - MPMX26_01105 0.13 -0.3 1,177,969 - MPMX26_01105 0.13 +0.4 1,177,969 - MPMX26_01105 0.13 +0.1 1,177,969 - MPMX26_01105 0.13 +0.1 1,177,990 - MPMX26_01105 0.16 +0.1 1,178,003 - MPMX26_01105 0.18 +0.1 1,178,026 - MPMX26_01105 0.21 +0.1 1,178,026 - MPMX26_01105 0.21 +0.7 1,178,034 - MPMX26_01105 0.22 -0.1 1,178,041 - MPMX26_01105 0.23 +0.1 1,178,046 - MPMX26_01105 0.24 -0.3 1,178,065 - MPMX26_01105 0.26 +0.1 1,178,065 - MPMX26_01105 0.26 +0.1 1,178,065 - MPMX26_01105 0.26 +0.8 1,178,084 - MPMX26_01105 0.29 +0.4 1,178,094 - MPMX26_01105 0.30 +0.5 1,178,115 - MPMX26_01105 0.33 +0.6
Or see this region's nucleotide sequence