Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01103

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01102 and MPMX26_01103 are separated by 3 nucleotidesMPMX26_01103 and MPMX26_01104 are separated by 49 nucleotidesMPMX26_01104 and MPMX26_01105 are separated by 37 nucleotides MPMX26_01102: MPMX26_01102 - hypothetical protein, at 1,175,223 to 1,176,245 _01102 MPMX26_01103: MPMX26_01103 - hypothetical protein, at 1,176,249 to 1,177,115 _01103 MPMX26_01104: MPMX26_01104 - Carboxy-S-adenosyl-L-methionine synthase, at 1,177,165 to 1,177,839 _01104 MPMX26_01105: MPMX26_01105 - tRNA (guanine-N(7)-)-methyltransferase, at 1,177,877 to 1,178,593 _01105 Position (kb) 1176 1177 1178Strain fitness (log2 ratio) -1 0 1at 1175.339 kb on + strand, within MPMX26_01102at 1175.354 kb on + strand, within MPMX26_01102at 1175.984 kb on + strand, within MPMX26_01102at 1176.065 kb on + strand, within MPMX26_01102at 1176.146 kb on + strandat 1176.177 kb on + strandat 1176.215 kb on + strandat 1176.372 kb on + strand, within MPMX26_01103at 1176.911 kb on + strand, within MPMX26_01103at 1177.029 kb on + strandat 1177.829 kb on - strandat 1177.829 kb on - strandat 1177.831 kb on - strandat 1177.851 kb on - strandat 1177.929 kb on - strandat 1177.929 kb on - strandat 1177.929 kb on - strandat 1177.934 kb on - strandat 1177.934 kb on - strandat 1177.969 kb on - strand, within MPMX26_01105at 1177.969 kb on - strand, within MPMX26_01105at 1177.969 kb on - strand, within MPMX26_01105at 1177.969 kb on - strand, within MPMX26_01105at 1177.990 kb on - strand, within MPMX26_01105at 1178.003 kb on - strand, within MPMX26_01105at 1178.026 kb on - strand, within MPMX26_01105at 1178.026 kb on - strand, within MPMX26_01105at 1178.034 kb on - strand, within MPMX26_01105at 1178.041 kb on - strand, within MPMX26_01105at 1178.046 kb on - strand, within MPMX26_01105at 1178.065 kb on - strand, within MPMX26_01105at 1178.065 kb on - strand, within MPMX26_01105at 1178.065 kb on - strand, within MPMX26_01105at 1178.084 kb on - strand, within MPMX26_01105at 1178.094 kb on - strand, within MPMX26_01105at 1178.115 kb on - strand, within MPMX26_01105

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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1,175,339 + MPMX26_01102 0.11 -0.0
1,175,354 + MPMX26_01102 0.13 -1.2
1,175,984 + MPMX26_01102 0.74 +1.5
1,176,065 + MPMX26_01102 0.82 +0.0
1,176,146 + -1.3
1,176,177 + -1.2
1,176,215 + -0.3
1,176,372 + MPMX26_01103 0.14 +0.0
1,176,911 + MPMX26_01103 0.76 +0.8
1,177,029 + +0.6
1,177,829 - +0.7
1,177,829 - -0.2
1,177,831 - +0.6
1,177,851 - +0.9
1,177,929 - -0.2
1,177,929 - -0.4
1,177,929 - -0.3
1,177,934 - -0.1
1,177,934 - +0.3
1,177,969 - MPMX26_01105 0.13 -0.3
1,177,969 - MPMX26_01105 0.13 +0.4
1,177,969 - MPMX26_01105 0.13 +0.1
1,177,969 - MPMX26_01105 0.13 +0.1
1,177,990 - MPMX26_01105 0.16 +0.1
1,178,003 - MPMX26_01105 0.18 +0.1
1,178,026 - MPMX26_01105 0.21 +0.1
1,178,026 - MPMX26_01105 0.21 +0.7
1,178,034 - MPMX26_01105 0.22 -0.1
1,178,041 - MPMX26_01105 0.23 +0.1
1,178,046 - MPMX26_01105 0.24 -0.3
1,178,065 - MPMX26_01105 0.26 +0.1
1,178,065 - MPMX26_01105 0.26 +0.1
1,178,065 - MPMX26_01105 0.26 +0.8
1,178,084 - MPMX26_01105 0.29 +0.4
1,178,094 - MPMX26_01105 0.30 +0.5
1,178,115 - MPMX26_01105 0.33 +0.6

Or see this region's nucleotide sequence