Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00184

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00183 and MPMX26_00184 are separated by 529 nucleotidesMPMX26_00184 and MPMX26_00185 are separated by 29 nucleotides MPMX26_00183: MPMX26_00183 - Phosphate-specific transport system accessory protein PhoU, at 198,310 to 199,032 _00183 MPMX26_00184: MPMX26_00184 - putative Fe(2+)-trafficking protein, at 199,562 to 199,834 _00184 MPMX26_00185: MPMX26_00185 - Argininosuccinate lyase, at 199,864 to 201,243 _00185 Position (kb) 199 200Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 198.563 kb on + strand, within MPMX26_00183at 198.573 kb on + strand, within MPMX26_00183at 198.573 kb on + strand, within MPMX26_00183at 198.622 kb on + strand, within MPMX26_00183at 198.652 kb on + strand, within MPMX26_00183at 198.682 kb on + strand, within MPMX26_00183at 198.687 kb on + strand, within MPMX26_00183at 198.701 kb on + strand, within MPMX26_00183at 198.720 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.762 kb on + strand, within MPMX26_00183at 198.767 kb on + strand, within MPMX26_00183at 198.767 kb on + strand, within MPMX26_00183at 198.772 kb on + strand, within MPMX26_00183at 198.772 kb on + strand, within MPMX26_00183at 198.777 kb on + strand, within MPMX26_00183at 198.790 kb on + strand, within MPMX26_00183at 198.815 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.833 kb on + strand, within MPMX26_00183at 198.894 kb on + strand, within MPMX26_00183at 198.911 kb on + strand, within MPMX26_00183at 198.911 kb on + strand, within MPMX26_00183at 198.980 kb on + strandat 198.985 kb on + strandat 198.985 kb on + strandat 198.985 kb on + strandat 199.004 kb on + strandat 199.018 kb on + strandat 199.026 kb on + strandat 199.026 kb on + strandat 199.086 kb on - strandat 199.120 kb on - strandat 199.120 kb on - strandat 199.188 kb on - strandat 199.354 kb on - strandat 199.414 kb on - strandat 199.538 kb on + strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.690 kb on + strand, within MPMX26_00184at 199.695 kb on + strand, within MPMX26_00184at 199.698 kb on - strand, within MPMX26_00184at 199.702 kb on + strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.703 kb on - strand, within MPMX26_00184at 199.729 kb on - strand, within MPMX26_00184at 199.756 kb on - strand, within MPMX26_00184at 199.765 kb on - strand, within MPMX26_00184at 199.772 kb on - strand, within MPMX26_00184at 199.788 kb on - strand, within MPMX26_00184at 199.908 kb on - strandat 199.908 kb on - strandat 199.918 kb on - strandat 199.929 kb on - strandat 200.005 kb on - strand, within MPMX26_00185at 200.005 kb on - strand, within MPMX26_00185at 200.005 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.048 kb on - strand, within MPMX26_00185at 200.048 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.077 kb on - strand, within MPMX26_00185at 200.153 kb on - strand, within MPMX26_00185at 200.154 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.221 kb on - strand, within MPMX26_00185at 200.331 kb on - strand, within MPMX26_00185at 200.349 kb on - strand, within MPMX26_00185at 200.349 kb on - strand, within MPMX26_00185at 200.442 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.474 kb on - strand, within MPMX26_00185at 200.474 kb on - strand, within MPMX26_00185at 200.484 kb on - strand, within MPMX26_00185at 200.562 kb on - strand, within MPMX26_00185at 200.562 kb on - strand, within MPMX26_00185at 200.618 kb on - strand, within MPMX26_00185at 200.649 kb on - strand, within MPMX26_00185at 200.651 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.770 kb on - strand, within MPMX26_00185at 200.777 kb on - strand, within MPMX26_00185at 200.785 kb on - strand, within MPMX26_00185at 200.785 kb on - strand, within MPMX26_00185at 200.787 kb on - strand, within MPMX26_00185at 200.795 kb on - strand, within MPMX26_00185at 200.795 kb on - strand, within MPMX26_00185

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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198,563 + MPMX26_00183 0.35 -0.1
198,573 + MPMX26_00183 0.36 +0.9
198,573 + MPMX26_00183 0.36 -1.7
198,622 + MPMX26_00183 0.43 -0.4
198,652 + MPMX26_00183 0.47 -1.3
198,682 + MPMX26_00183 0.51 -0.3
198,687 + MPMX26_00183 0.52 -1.3
198,701 + MPMX26_00183 0.54 -0.4
198,720 + MPMX26_00183 0.57 -0.1
198,762 + MPMX26_00183 0.63 -1.3
198,762 + MPMX26_00183 0.63 -1.3
198,762 + MPMX26_00183 0.63 -4.1
198,762 + MPMX26_00183 0.63 -1.4
198,762 + MPMX26_00183 0.63 -0.7
198,762 + MPMX26_00183 0.63 +0.1
198,767 + MPMX26_00183 0.63 -1.6
198,767 + MPMX26_00183 0.63 +0.6
198,772 + MPMX26_00183 0.64 -1.3
198,772 + MPMX26_00183 0.64 +0.7
198,777 + MPMX26_00183 0.65 +0.3
198,790 + MPMX26_00183 0.66 +0.3
198,815 + MPMX26_00183 0.70 -0.4
198,833 + MPMX26_00183 0.72 -1.3
198,833 + MPMX26_00183 0.72 -0.4
198,833 + MPMX26_00183 0.72 -2.0
198,833 + MPMX26_00183 0.72 -0.9
198,833 + MPMX26_00183 0.72 -0.9
198,833 + MPMX26_00183 0.72 +0.3
198,833 + MPMX26_00183 0.72 -1.4
198,833 + MPMX26_00183 0.72 -0.1
198,894 + MPMX26_00183 0.81 -0.7
198,911 + MPMX26_00183 0.83 -0.1
198,911 + MPMX26_00183 0.83 -1.1
198,980 + -0.8
198,985 + -1.1
198,985 + +0.3
198,985 + -0.1
199,004 + -0.3
199,018 + -1.6
199,026 + +0.1
199,026 + +0.4
199,086 - -1.0
199,120 - +0.2
199,120 - +0.1
199,188 - -0.3
199,354 - +0.3
199,414 - +1.0
199,538 + +1.1
199,546 - +0.1
199,546 - +0.1
199,546 - +1.2
199,546 - -0.3
199,546 - +1.3
199,546 - -0.4
199,690 + MPMX26_00184 0.47 -0.5
199,695 + MPMX26_00184 0.49 -0.0
199,698 - MPMX26_00184 0.50 -0.6
199,702 + MPMX26_00184 0.51 -0.3
199,702 - MPMX26_00184 0.51 -0.4
199,702 - MPMX26_00184 0.51 -0.2
199,702 - MPMX26_00184 0.51 -0.3
199,703 - MPMX26_00184 0.52 -0.2
199,729 - MPMX26_00184 0.61 -0.3
199,756 - MPMX26_00184 0.71 -0.6
199,765 - MPMX26_00184 0.74 -0.3
199,772 - MPMX26_00184 0.77 -0.4
199,788 - MPMX26_00184 0.83 +0.0
199,908 - -3.0
199,908 - -4.8
199,918 - -3.8
199,929 - -3.2
200,005 - MPMX26_00185 0.10 -4.2
200,005 - MPMX26_00185 0.10 -4.1
200,005 - MPMX26_00185 0.10 -4.1
200,015 - MPMX26_00185 0.11 -2.8
200,015 - MPMX26_00185 0.11 -3.5
200,015 - MPMX26_00185 0.11 -2.5
200,036 - MPMX26_00185 0.12 -0.7
200,036 - MPMX26_00185 0.12 -2.8
200,036 - MPMX26_00185 0.12 -2.4
200,036 - MPMX26_00185 0.12 -4.4
200,036 - MPMX26_00185 0.12 -1.3
200,048 - MPMX26_00185 0.13 -4.1
200,048 - MPMX26_00185 0.13 -2.4
200,058 - MPMX26_00185 0.14 -4.0
200,058 - MPMX26_00185 0.14 -2.9
200,058 - MPMX26_00185 0.14 -1.7
200,058 - MPMX26_00185 0.14 -4.6
200,058 - MPMX26_00185 0.14 -2.9
200,058 - MPMX26_00185 0.14 -4.9
200,058 - MPMX26_00185 0.14 -3.8
200,058 - MPMX26_00185 0.14 -4.7
200,058 - MPMX26_00185 0.14 -6.5
200,077 - MPMX26_00185 0.15 -3.2
200,153 - MPMX26_00185 0.21 -2.3
200,154 - MPMX26_00185 0.21 -4.4
200,180 - MPMX26_00185 0.23 -0.4
200,180 - MPMX26_00185 0.23 -3.2
200,180 - MPMX26_00185 0.23 -3.1
200,180 - MPMX26_00185 0.23 -3.9
200,221 - MPMX26_00185 0.26 -4.2
200,331 - MPMX26_00185 0.34 -5.2
200,349 - MPMX26_00185 0.35 -4.2
200,349 - MPMX26_00185 0.35 -5.9
200,442 - MPMX26_00185 0.42 -4.2
200,464 - MPMX26_00185 0.43 -5.0
200,464 - MPMX26_00185 0.43 -3.9
200,464 - MPMX26_00185 0.43 -4.3
200,464 - MPMX26_00185 0.43 -2.4
200,474 - MPMX26_00185 0.44 -1.6
200,474 - MPMX26_00185 0.44 -0.9
200,484 - MPMX26_00185 0.45 -4.6
200,562 - MPMX26_00185 0.51 -3.6
200,562 - MPMX26_00185 0.51 -3.2
200,618 - MPMX26_00185 0.55 -2.5
200,649 - MPMX26_00185 0.57 -4.0
200,651 - MPMX26_00185 0.57 -3.4
200,673 - MPMX26_00185 0.59 -5.3
200,673 - MPMX26_00185 0.59 -3.3
200,673 - MPMX26_00185 0.59 -4.1
200,673 - MPMX26_00185 0.59 -4.1
200,770 - MPMX26_00185 0.66 -2.5
200,777 - MPMX26_00185 0.66 -3.2
200,785 - MPMX26_00185 0.67 -2.5
200,785 - MPMX26_00185 0.67 -3.4
200,787 - MPMX26_00185 0.67 -1.9
200,795 - MPMX26_00185 0.67 -3.8
200,795 - MPMX26_00185 0.67 -2.5

Or see this region's nucleotide sequence