Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00037

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00035 and MPMX26_00036 are separated by 79 nucleotidesMPMX26_00036 and MPMX26_00037 are separated by 136 nucleotidesMPMX26_00037 and MPMX26_00038 are separated by 173 nucleotides MPMX26_00035: MPMX26_00035 - Thiol:disulfide interchange protein DsbA, at 37,492 to 38,109 _00035 MPMX26_00036: MPMX26_00036 - hypothetical protein, at 38,189 to 38,824 _00036 MPMX26_00037: MPMX26_00037 - HTH-type transcriptional repressor FabR, at 38,961 to 39,596 _00037 MPMX26_00038: MPMX26_00038 - NADPH oxidoreductase, at 39,770 to 40,789 _00038 Position (kb) 38 39 40Strain fitness (log2 ratio) -2 -1 0 1 2at 37.968 kb on + strand, within MPMX26_00035at 37.968 kb on + strand, within MPMX26_00035at 37.986 kb on + strand, within MPMX26_00035at 38.008 kb on - strand, within MPMX26_00035at 38.017 kb on + strand, within MPMX26_00035at 38.033 kb on + strand, within MPMX26_00035at 38.051 kb on + strandat 38.101 kb on + strandat 38.147 kb on + strandat 38.223 kb on + strandat 38.227 kb on - strandat 38.270 kb on - strand, within MPMX26_00036at 38.270 kb on - strand, within MPMX26_00036at 38.270 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.345 kb on - strand, within MPMX26_00036at 38.361 kb on - strand, within MPMX26_00036at 38.363 kb on - strand, within MPMX26_00036at 38.363 kb on - strand, within MPMX26_00036at 38.388 kb on - strand, within MPMX26_00036at 38.427 kb on - strand, within MPMX26_00036at 38.427 kb on - strand, within MPMX26_00036at 38.442 kb on - strand, within MPMX26_00036at 38.459 kb on - strand, within MPMX26_00036at 38.464 kb on - strand, within MPMX26_00036at 38.469 kb on - strand, within MPMX26_00036at 38.472 kb on + strand, within MPMX26_00036at 38.472 kb on + strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.493 kb on + strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.515 kb on - strand, within MPMX26_00036at 38.515 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.588 kb on - strand, within MPMX26_00036at 38.596 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.686 kb on + strand, within MPMX26_00036at 38.686 kb on + strand, within MPMX26_00036at 38.694 kb on - strand, within MPMX26_00036at 38.708 kb on - strand, within MPMX26_00036at 38.710 kb on - strand, within MPMX26_00036at 38.710 kb on - strand, within MPMX26_00036at 38.726 kb on - strand, within MPMX26_00036at 38.726 kb on - strand, within MPMX26_00036at 38.817 kb on + strandat 38.856 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.966 kb on - strandat 38.973 kb on - strandat 39.010 kb on - strandat 39.012 kb on - strandat 39.053 kb on - strand, within MPMX26_00037at 39.060 kb on - strand, within MPMX26_00037at 39.060 kb on - strand, within MPMX26_00037at 39.065 kb on - strand, within MPMX26_00037at 39.065 kb on - strand, within MPMX26_00037at 39.083 kb on - strand, within MPMX26_00037at 39.083 kb on - strand, within MPMX26_00037at 39.100 kb on - strand, within MPMX26_00037at 39.102 kb on - strand, within MPMX26_00037at 39.102 kb on - strand, within MPMX26_00037at 39.121 kb on - strand, within MPMX26_00037at 39.121 kb on - strand, within MPMX26_00037at 39.157 kb on - strand, within MPMX26_00037at 39.164 kb on + strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.281 kb on + strand, within MPMX26_00037at 39.281 kb on + strand, within MPMX26_00037at 39.289 kb on - strand, within MPMX26_00037at 39.299 kb on - strand, within MPMX26_00037at 39.322 kb on - strand, within MPMX26_00037at 39.322 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.380 kb on - strand, within MPMX26_00037at 39.411 kb on - strand, within MPMX26_00037at 39.421 kb on - strand, within MPMX26_00037at 39.422 kb on - strand, within MPMX26_00037at 39.429 kb on - strand, within MPMX26_00037at 39.467 kb on - strand, within MPMX26_00037at 39.472 kb on - strand, within MPMX26_00037at 39.472 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.526 kb on + strand, within MPMX26_00037at 39.526 kb on - strand, within MPMX26_00037at 39.531 kb on - strand, within MPMX26_00037at 39.531 kb on - strand, within MPMX26_00037at 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.572 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.759 kb on + strandat 39.759 kb on + strandat 39.765 kb on - strandat 39.838 kb on + strandat 39.845 kb on - strandat 39.885 kb on + strand, within MPMX26_00038at 39.886 kb on + strand, within MPMX26_00038at 39.886 kb on + strand, within MPMX26_00038at 39.940 kb on + strand, within MPMX26_00038at 39.950 kb on + strand, within MPMX26_00038at 39.963 kb on - strand, within MPMX26_00038at 39.999 kb on + strand, within MPMX26_00038at 40.004 kb on + strand, within MPMX26_00038at 40.059 kb on + strand, within MPMX26_00038at 40.059 kb on + strand, within MPMX26_00038at 40.067 kb on + strand, within MPMX26_00038at 40.138 kb on + strand, within MPMX26_00038at 40.140 kb on - strand, within MPMX26_00038at 40.152 kb on - strand, within MPMX26_00038at 40.250 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.335 kb on - strand, within MPMX26_00038at 40.375 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.465 kb on - strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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37,968 + MPMX26_00035 0.77 +0.2
37,968 + MPMX26_00035 0.77 -0.1
37,986 + MPMX26_00035 0.80 +0.0
38,008 - MPMX26_00035 0.83 +0.1
38,017 + MPMX26_00035 0.85 -0.1
38,033 + MPMX26_00035 0.88 +0.2
38,051 + +0.5
38,101 + -0.3
38,147 + -0.3
38,223 + -1.1
38,227 - -0.2
38,270 - MPMX26_00036 0.13 +0.3
38,270 - MPMX26_00036 0.13 +0.1
38,270 - MPMX26_00036 0.13 -0.0
38,337 - MPMX26_00036 0.23 -0.4
38,337 - MPMX26_00036 0.23 +0.2
38,337 - MPMX26_00036 0.23 +0.3
38,337 - MPMX26_00036 0.23 -0.2
38,337 - MPMX26_00036 0.23 -0.5
38,345 - MPMX26_00036 0.25 +0.1
38,361 - MPMX26_00036 0.27 -0.6
38,363 - MPMX26_00036 0.27 +0.0
38,363 - MPMX26_00036 0.27 -0.3
38,388 - MPMX26_00036 0.31 +0.6
38,427 - MPMX26_00036 0.37 -0.3
38,427 - MPMX26_00036 0.37 -0.0
38,442 - MPMX26_00036 0.40 -0.2
38,459 - MPMX26_00036 0.42 +0.3
38,464 - MPMX26_00036 0.43 +0.2
38,469 - MPMX26_00036 0.44 +0.5
38,472 + MPMX26_00036 0.44 -0.4
38,472 + MPMX26_00036 0.44 -0.1
38,485 - MPMX26_00036 0.47 +0.1
38,485 - MPMX26_00036 0.47 +0.1
38,485 - MPMX26_00036 0.47 -0.3
38,485 - MPMX26_00036 0.47 -0.5
38,493 + MPMX26_00036 0.48 +1.0
38,501 - MPMX26_00036 0.49 +0.7
38,501 - MPMX26_00036 0.49 -0.3
38,501 - MPMX26_00036 0.49 +0.4
38,501 - MPMX26_00036 0.49 +0.2
38,501 - MPMX26_00036 0.49 -0.1
38,515 - MPMX26_00036 0.51 -0.6
38,515 - MPMX26_00036 0.51 -1.0
38,517 - MPMX26_00036 0.52 -0.3
38,517 - MPMX26_00036 0.52 +0.6
38,517 - MPMX26_00036 0.52 +0.6
38,517 - MPMX26_00036 0.52 -0.2
38,588 - MPMX26_00036 0.63 +0.1
38,596 - MPMX26_00036 0.64 +0.7
38,684 - MPMX26_00036 0.78 -0.1
38,684 - MPMX26_00036 0.78 +0.8
38,684 - MPMX26_00036 0.78 -0.1
38,684 - MPMX26_00036 0.78 -0.0
38,686 + MPMX26_00036 0.78 -0.4
38,686 + MPMX26_00036 0.78 +0.1
38,694 - MPMX26_00036 0.79 -0.4
38,708 - MPMX26_00036 0.82 -0.2
38,710 - MPMX26_00036 0.82 -0.1
38,710 - MPMX26_00036 0.82 -0.6
38,726 - MPMX26_00036 0.84 +0.7
38,726 - MPMX26_00036 0.84 -0.1
38,817 + -0.1
38,856 - +1.1
38,961 - -0.1
38,961 - +1.1
38,961 - +0.7
38,961 - -1.1
38,966 - -0.4
38,973 - -0.1
39,010 - -0.2
39,012 - -1.1
39,053 - MPMX26_00037 0.14 +0.1
39,060 - MPMX26_00037 0.16 -0.9
39,060 - MPMX26_00037 0.16 -0.5
39,065 - MPMX26_00037 0.16 -0.0
39,065 - MPMX26_00037 0.16 -0.4
39,083 - MPMX26_00037 0.19 +0.3
39,083 - MPMX26_00037 0.19 -0.9
39,100 - MPMX26_00037 0.22 -0.2
39,102 - MPMX26_00037 0.22 -1.1
39,102 - MPMX26_00037 0.22 +0.3
39,121 - MPMX26_00037 0.25 -0.7
39,121 - MPMX26_00037 0.25 +1.3
39,157 - MPMX26_00037 0.31 -0.8
39,164 + MPMX26_00037 0.32 +1.6
39,247 - MPMX26_00037 0.45 +0.2
39,247 - MPMX26_00037 0.45 -0.9
39,247 - MPMX26_00037 0.45 -1.1
39,247 - MPMX26_00037 0.45 -0.9
39,281 + MPMX26_00037 0.50 -0.9
39,281 + MPMX26_00037 0.50 -1.1
39,289 - MPMX26_00037 0.52 -1.1
39,299 - MPMX26_00037 0.53 -0.3
39,322 - MPMX26_00037 0.57 -0.4
39,322 - MPMX26_00037 0.57 -0.7
39,365 - MPMX26_00037 0.64 -0.0
39,365 - MPMX26_00037 0.64 -1.0
39,365 - MPMX26_00037 0.64 -0.4
39,380 - MPMX26_00037 0.66 -0.4
39,411 - MPMX26_00037 0.71 -0.6
39,421 - MPMX26_00037 0.72 -1.1
39,422 - MPMX26_00037 0.72 -0.8
39,429 - MPMX26_00037 0.74 +1.1
39,467 - MPMX26_00037 0.80 -0.1
39,472 - MPMX26_00037 0.80 +0.4
39,472 - MPMX26_00037 0.80 -0.4
39,505 - MPMX26_00037 0.86 -1.0
39,505 - MPMX26_00037 0.86 -1.2
39,505 - MPMX26_00037 0.86 +0.2
39,505 - MPMX26_00037 0.86 -0.2
39,505 - MPMX26_00037 0.86 -0.2
39,505 - MPMX26_00037 0.86 -0.8
39,505 - MPMX26_00037 0.86 -1.1
39,505 - MPMX26_00037 0.86 -0.2
39,505 - MPMX26_00037 0.86 -1.2
39,505 - MPMX26_00037 0.86 -0.7
39,505 - MPMX26_00037 0.86 -0.6
39,505 - MPMX26_00037 0.86 -0.6
39,505 - MPMX26_00037 0.86 -0.2
39,505 - MPMX26_00037 0.86 -0.5
39,505 - MPMX26_00037 0.86 -1.2
39,505 - MPMX26_00037 0.86 -0.5
39,526 + MPMX26_00037 0.89 +0.3
39,526 - MPMX26_00037 0.89 -0.2
39,531 - MPMX26_00037 0.90 -1.0
39,531 - MPMX26_00037 0.90 -1.0
39,563 - -0.2
39,563 - -0.1
39,563 - -1.0
39,563 - -0.6
39,563 - -1.2
39,563 - -1.1
39,572 - -0.9
39,627 - -0.7
39,627 - +1.4
39,627 - -0.3
39,627 - -0.3
39,759 + +0.1
39,759 + +2.1
39,765 - -0.2
39,838 + +0.1
39,845 - -1.1
39,885 + MPMX26_00038 0.11 +0.6
39,886 + MPMX26_00038 0.11 +0.3
39,886 + MPMX26_00038 0.11 +0.1
39,940 + MPMX26_00038 0.17 +0.6
39,950 + MPMX26_00038 0.18 -0.4
39,963 - MPMX26_00038 0.19 -0.4
39,999 + MPMX26_00038 0.22 +0.7
40,004 + MPMX26_00038 0.23 +0.5
40,059 + MPMX26_00038 0.28 -0.2
40,059 + MPMX26_00038 0.28 +0.3
40,067 + MPMX26_00038 0.29 +0.6
40,138 + MPMX26_00038 0.36 -0.1
40,140 - MPMX26_00038 0.36 +0.5
40,152 - MPMX26_00038 0.37 +0.2
40,250 - MPMX26_00038 0.47 +1.0
40,286 - MPMX26_00038 0.51 +0.1
40,286 - MPMX26_00038 0.51 -0.1
40,286 - MPMX26_00038 0.51 +0.8
40,291 - MPMX26_00038 0.51 -0.8
40,291 - MPMX26_00038 0.51 -0.4
40,291 - MPMX26_00038 0.51 +0.5
40,291 - MPMX26_00038 0.51 -0.6
40,291 - MPMX26_00038 0.51 +0.3
40,291 - MPMX26_00038 0.51 +0.2
40,291 - MPMX26_00038 0.51 -1.6
40,291 - MPMX26_00038 0.51 -0.4
40,323 - MPMX26_00038 0.54 -2.0
40,323 - MPMX26_00038 0.54 +0.1
40,323 - MPMX26_00038 0.54 -0.7
40,335 - MPMX26_00038 0.55 +0.8
40,375 - MPMX26_00038 0.59 +0.6
40,392 - MPMX26_00038 0.61 +1.2
40,392 - MPMX26_00038 0.61 -0.0
40,392 - MPMX26_00038 0.61 -0.1
40,465 - MPMX26_00038 0.68 -0.2
40,595 + MPMX26_00038 0.81 -0.5
40,595 + MPMX26_00038 0.81 -0.0
40,595 + MPMX26_00038 0.81 -1.3

Or see this region's nucleotide sequence