Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5310

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
2,317,502	-				+0.5
2,317,782	+		GFF5308	0.23	-0.6
2,317,783	-		GFF5308	0.24	-0.5
2,318,051	+		GFF5309	0.18	-1.6
2,318,153	+		GFF5309	0.37	+1.4
2,318,154	-		GFF5309	0.38	-0.4
2,318,560	+				-0.1
2,318,561	-				+0.4
2,318,561	-				+0.1
2,318,561	-				+0.2
2,318,624	-		GFF5310	0.11	-1.2
2,318,669	-		GFF5310	0.14	+0.9
2,318,833	-		GFF5310	0.25	+0.3
2,318,893	+		GFF5310	0.30	+0.1
2,318,962	-		GFF5310	0.34	+0.5
2,319,581	-		GFF5310	0.78	-0.3
2,319,734	-		GFF5310	0.89	+0.7
2,320,197	+		GFF5311	0.36	+2.0
2,320,856	+		GFF5312	0.47	+1.7
2,320,857	-		GFF5312	0.47	+1.4
2,320,878	-		GFF5312	0.56	+0.1