Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4699

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,650,046	+				-0.5
1,650,046	+				-0.5
1,650,047	-				+0.6
1,650,072	+				-0.3
1,650,072	+				-0.4
1,650,072	+				-0.1
1,650,072	+				-0.3
1,650,072	+				-0.4
1,650,072	+				-0.3
1,650,073	-				-0.1
1,650,073	-				+0.4
1,650,073	-				+0.2
1,650,073	-				+0.1
1,650,186	+				-0.2
1,650,187	-				+0.1
1,650,203	-				-0.4
1,650,203	-				+0.6
1,650,210	-				+0.9
1,650,245	+				-0.1
1,650,245	+				-0.6
1,650,246	-				-0.3
1,650,252	+				-0.1
1,650,252	+				+0.5
1,650,253	-				+0.1
1,650,313	+				-0.1
1,650,313	+				-0.7
1,650,313	+				+1.2
1,650,314	-				+1.7
1,650,314	-				+0.2
1,650,314	-				+0.8
1,650,328	+				+0.2
1,650,328	+				-0.4
1,650,328	+				+0.0
1,650,329	-				-0.4
1,650,331	+				-0.1
1,650,331	+				-2.4
1,650,331	+				-0.2
1,650,331	+				+0.5
1,650,332	-				+0.6
1,650,332	-				+0.0
1,650,332	-				+0.8
1,650,332	-				-0.3
1,650,520	+		GFF4698	0.49	+0.4
1,650,520	+		GFF4698	0.49	+0.4
1,650,521	-		GFF4698	0.49	-0.1
1,651,737	+				+0.2
1,652,577	+		GFF4700	0.56	-0.5
1,652,578	-		GFF4700	0.56	-0.3