Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4619

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,565,558	-		GFF4618	0.12	-0.2
1,565,594	+		GFF4618	0.16	-0.3
1,565,594	+		GFF4618	0.16	+0.2
1,565,594	+		GFF4618	0.16	-0.4
1,565,594	+		GFF4618	0.16	-0.0
1,565,595	-		GFF4618	0.16	-0.4
1,565,599	+		GFF4618	0.16	+0.1
1,565,599	+		GFF4618	0.16	-0.5
1,565,599	+		GFF4618	0.16	-0.9
1,565,801	+		GFF4618	0.38	+0.1
1,565,801	+		GFF4618	0.38	-0.2
1,565,843	+		GFF4618	0.43	-0.2
1,565,844	-		GFF4618	0.43	-1.7
1,565,844	-		GFF4618	0.43	-1.1
1,565,877	-		GFF4618	0.46	+0.3
1,565,877	-		GFF4618	0.46	+0.7
1,565,888	+		GFF4618	0.48	+0.5
1,565,888	+		GFF4618	0.48	+1.1
1,565,888	+		GFF4618	0.48	-0.4
1,565,889	-		GFF4618	0.48	-0.3
1,565,889	-		GFF4618	0.48	+0.7
1,565,889	-		GFF4618	0.48	-0.3
1,565,889	-		GFF4618	0.48	-0.0
1,565,889	-		GFF4618	0.48	+0.3
1,565,889	-		GFF4618	0.48	-0.7
1,565,889	-		GFF4618	0.48	+0.5
1,565,889	-		GFF4618	0.48	-0.1
1,565,889	-		GFF4618	0.48	+0.3
1,566,064	-		GFF4618	0.67	+0.1
1,566,135	-		GFF4618	0.74	-1.6
1,566,246	+		GFF4618	0.87	-0.4
1,566,247	-		GFF4618	0.87	+0.9
1,566,275	+		GFF4618	0.90	+0.1
1,566,275	+		GFF4618	0.90	+0.0
1,566,275	+		GFF4618	0.90	-0.1
1,566,275	+		GFF4618	0.90	+0.4
1,566,276	-		GFF4618	0.90	+0.1
1,566,276	-		GFF4618	0.90	-0.1
1,566,323	-				+1.1
1,566,556	+		GFF4619	0.14	-0.2
1,566,557	-		GFF4619	0.14	-0.4
1,566,908	-		GFF4619	0.41	+0.2
1,566,923	-		GFF4619	0.42	-0.3
1,566,923	-		GFF4619	0.42	+0.3
1,567,369	+		GFF4619	0.75	+0.4
1,567,369	+		GFF4619	0.75	+0.1
1,567,369	+		GFF4619	0.75	+0.9
1,567,370	-		GFF4619	0.75	+0.6
1,567,370	-		GFF4619	0.75	+1.2
1,567,556	-		GFF4619	0.89	+0.5
1,567,696	+				+0.1
1,567,696	+				-0.4
1,568,224	-		GFF4620	0.52	-0.1
1,568,295	+		GFF4620	0.59	-2.0
1,568,295	+		GFF4620	0.59	+0.8
1,568,296	-		GFF4620	0.59	-0.4
1,568,296	-		GFF4620	0.59	+0.3
1,568,296	-		GFF4620	0.59	-1.0
1,568,419	-		GFF4620	0.73	-1.5
1,568,569	-		GFF4620	0.88	+0.1
1,568,569	-		GFF4620	0.88	+1.1
1,568,688	-				+0.2