Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4603

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,546,649	+		GFF4602	0.14	-0.1
1,546,650	-		GFF4602	0.14	-0.1
1,546,650	-		GFF4602	0.14	+1.9
1,546,682	+		GFF4602	0.17	-0.5
1,546,682	+		GFF4602	0.17	-1.2
1,546,683	-		GFF4602	0.18	+0.1
1,546,805	+		GFF4602	0.29	-0.1
1,546,805	+		GFF4602	0.29	-0.5
1,546,805	+		GFF4602	0.29	+0.7
1,546,805	+		GFF4602	0.29	-0.6
1,546,806	-		GFF4602	0.30	-0.6
1,546,917	-		GFF4602	0.41	-0.3
1,547,066	+		GFF4602	0.55	-1.5
1,547,106	-		GFF4602	0.59	-0.5
1,547,106	-		GFF4602	0.59	+0.1
1,547,791	+		GFF4603	0.16	+1.0
1,547,792	-		GFF4603	0.16	+0.1
1,547,951	-		GFF4603	0.25	-0.0
1,547,951	-		GFF4603	0.25	-1.2
1,548,167	-		GFF4603	0.38	+1.1
1,548,167	-		GFF4603	0.38	+0.3
1,548,757	+		GFF4603	0.74	+0.3
1,548,758	-		GFF4603	0.74	+0.1
1,549,234	-				-0.0
1,549,395	+		GFF4604	0.20	+0.1
1,549,395	+		GFF4604	0.20	-0.3
1,549,395	+		GFF4604	0.20	-0.3
1,549,395	+		GFF4604	0.20	+0.2
1,549,395	+		GFF4604	0.20	-0.7
1,549,396	-		GFF4604	0.20	+0.8
1,549,396	-		GFF4604	0.20	-0.6
1,549,396	-		GFF4604	0.20	-0.5
1,549,396	-		GFF4604	0.20	-0.3
1,549,396	-		GFF4604	0.20	-0.2
1,549,533	+		GFF4604	0.35	-0.0
1,549,534	-		GFF4604	0.35	+0.4
1,549,678	-		GFF4604	0.50	+0.1
1,549,678	-		GFF4604	0.50	+0.3
1,549,758	+		GFF4604	0.59	+0.1
1,550,118	+				+0.1
1,550,118	+				+1.3
1,550,119	-				-0.0
1,550,119	-				+1.1
1,550,119	-				+0.1