Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4584

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,527,759	+		GFF4583	0.51	+0.0
1,527,759	+		GFF4583	0.51	+0.1
1,527,759	+		GFF4583	0.51	-0.1
1,527,759	+		GFF4583	0.51	+0.4
1,527,759	+		GFF4583	0.51	-0.1
1,527,759	+		GFF4583	0.51	-0.6
1,527,760	-		GFF4583	0.51	+0.7
1,527,760	-		GFF4583	0.51	+0.3
1,527,760	-		GFF4583	0.51	-0.1
1,527,760	-		GFF4583	0.51	-0.0
1,527,863	+		GFF4583	0.62	-0.5
1,527,864	+		GFF4583	0.62	-0.3
1,527,978	+		GFF4583	0.73	+0.5
1,527,978	+		GFF4583	0.73	+0.3
1,527,979	-		GFF4583	0.73	-0.2
1,528,036	-		GFF4583	0.79	-0.1
1,528,036	-		GFF4583	0.79	+0.9
1,528,337	+				+2.3
1,528,337	+				+0.1
1,528,619	+				-0.2
1,528,619	+				-0.3
1,528,619	+				+0.4
1,528,619	+				+0.5
1,528,619	+				-0.9
1,528,620	-				+0.3
1,528,620	-				+0.3
1,528,620	-				+0.8
1,528,757	+		GFF4584	0.17	-0.7
1,528,758	-		GFF4584	0.17	-0.9
1,528,994	+		GFF4584	0.31	-0.7
1,528,995	-		GFF4584	0.31	+0.7
1,528,995	-		GFF4584	0.31	-0.2
1,528,995	-		GFF4584	0.31	-0.4
1,529,396	+		GFF4584	0.54	+0.7
1,529,433	-		GFF4584	0.57	+0.6
1,529,433	-		GFF4584	0.57	+0.6
1,529,561	+		GFF4584	0.64	+0.3
1,529,562	-		GFF4584	0.64	-0.9
1,529,562	-		GFF4584	0.64	-0.7
1,529,562	-		GFF4584	0.64	-0.3
1,529,562	-		GFF4584	0.64	-2.6
1,529,562	-		GFF4584	0.64	-0.2
1,529,562	-		GFF4584	0.64	-0.2
1,529,571	+		GFF4584	0.65	-0.1
1,529,571	+		GFF4584	0.65	-0.4
1,529,572	-		GFF4584	0.65	-0.4
1,529,747	+		GFF4584	0.75	+0.1
1,529,747	+		GFF4584	0.75	+0.0
1,529,747	+		GFF4584	0.75	+0.2
1,529,747	+		GFF4584	0.75	-0.5
1,529,747	+		GFF4584	0.75	+0.3
1,529,748	-		GFF4584	0.75	+0.3
1,529,877	-		GFF4584	0.82	+0.8
1,529,922	-		GFF4584	0.85	+0.0
1,530,241	+		GFF4585	0.36	+0.3
1,530,241	+		GFF4585	0.36	-0.1
1,530,242	-		GFF4585	0.36	-0.1
1,530,242	-		GFF4585	0.36	+0.3
1,530,330	-		GFF4585	0.76	+0.2
1,530,834	+		GFF4586	0.29	-1.3
1,530,835	-		GFF4586	0.29	+0.9
1,530,835	-		GFF4586	0.29	+0.3
1,530,835	-		GFF4586	0.29	+0.1
1,530,867	+		GFF4586	0.31	+0.4
1,530,867	+		GFF4586	0.31	+0.1
1,530,868	-		GFF4586	0.31	+0.7
1,530,913	-		GFF4586	0.34	+1.5
1,530,952	-		GFF4586	0.36	-0.5