Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4551

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,483,374	+		GFF4551	0.37	-1.0
1,483,404	+		GFF4551	0.39	+0.2
1,483,404	+		GFF4551	0.39	+0.0
1,483,404	+		GFF4551	0.39	-1.0
1,483,404	+		GFF4551	0.39	+0.3
1,483,404	+		GFF4551	0.39	+0.7
1,483,404	+		GFF4551	0.39	-1.3
1,483,404	+		GFF4551	0.39	-0.3
1,483,405	-		GFF4551	0.39	+0.7
1,483,455	+		GFF4551	0.44	-0.1
1,483,608	+		GFF4551	0.57	+0.3
1,483,615	-		GFF4551	0.58	+0.2
1,483,615	-		GFF4551	0.58	+0.7
1,483,812	+		GFF4551	0.75	-0.2
1,483,813	-		GFF4551	0.75	+1.1
1,483,813	-		GFF4551	0.75	+0.6
1,484,047	+				+0.1
1,484,150	+				-0.7
1,484,150	+				-0.2
1,484,151	-				+0.2