Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF420

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
90,049	+		GFF418	0.45	-0.8
90,145	+		GFF418	0.58	+0.2
90,486	+				-0.0
90,486	+				-0.6
90,598	-		GFF419	0.30	-0.4
90,696	+		GFF419	0.56	-0.3
90,696	+		GFF419	0.56	-0.3
90,697	-		GFF419	0.57	-1.3
90,787	-		GFF419	0.81	+0.8
91,034	+				-0.5
91,035	-				-0.3
91,035	-				-0.8
91,040	+				-0.4
91,040	+				+0.3
91,040	+				-1.6
91,040	+				-0.1
91,040	+				-0.2
91,040	+				+0.1
91,041	-				+0.4
91,041	-				-0.7
91,041	-				-0.4
91,041	-				-0.0
91,041	-				-0.1
91,041	-				-0.2
91,041	-				+0.0
91,497	-		GFF420	0.35	+0.5
92,276	+		GFF420	0.85	+1.0
92,414	+				+0.2
92,414	+				-0.1
92,414	+				+1.7
92,414	+				-1.1
92,415	-				-0.1
92,472	-				-0.3
92,929	+		GFF421	0.48	+0.0
92,929	+		GFF421	0.48	-0.2
93,089	-		GFF421	0.66	+0.9
93,131	-		GFF421	0.71	+0.9
93,368	-				-0.0
93,368	-				+0.4