Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF413

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
81,427	+		GFF412	0.52	+0.2
81,446	-		GFF412	0.53	-0.1
81,712	+		GFF412	0.68	+0.8
81,712	+		GFF412	0.68	-0.1
81,757	+		GFF412	0.70	-0.8
81,757	+		GFF412	0.70	-0.8
81,757	+		GFF412	0.70	+1.0
81,758	-		GFF412	0.71	+0.8
81,758	-		GFF412	0.71	+0.2
81,758	-		GFF412	0.71	-0.0
81,784	+		GFF412	0.72	-0.0
81,785	-		GFF412	0.72	-0.8
81,814	+		GFF412	0.74	+1.9
81,814	+		GFF412	0.74	+0.2
81,815	-		GFF412	0.74	+0.3
81,815	-		GFF412	0.74	-0.3
81,815	-		GFF412	0.74	-0.0
81,815	-		GFF412	0.74	-0.3
82,063	+		GFF412	0.87	+0.2
82,063	+		GFF412	0.87	+0.7
82,064	-		GFF412	0.88	+0.3
82,097	-		GFF412	0.89	+0.5
82,162	+				+0.9
82,163	-				-0.5
82,163	-				-0.1
82,192	+				-0.1
82,192	+				+0.5
82,192	+				+0.8
82,285	+				-0.5
82,469	+		GFF413	0.34	+1.9
82,469	+		GFF413	0.34	+0.0
82,617	-		GFF413	0.67	+0.5
82,658	+		GFF413	0.77	+0.4
83,023	-				-0.2
83,023	-				+0.2
83,023	-				+0.1
83,106	+		GFF414	0.13	-0.5
83,106	+		GFF414	0.13	-0.6
83,157	-		GFF414	0.15	+0.3
83,251	-		GFF414	0.19	+0.7
83,445	+		GFF414	0.27	+0.3
83,445	+		GFF414	0.27	-0.5
83,446	-		GFF414	0.27	+0.7
83,592	+		GFF414	0.33	-0.1
83,592	+		GFF414	0.33	-0.1
83,724	+		GFF414	0.39	-0.2
83,724	+		GFF414	0.39	-0.2
83,724	+		GFF414	0.39	-0.2