Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2481

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
62,822	-		GFF2479	0.80	-0.7
63,518	+				+0.2
63,518	+				-0.1
63,519	-				-0.5
63,519	-				-0.1
63,519	-				+0.4
63,519	-				-0.5
63,519	-				-0.3
65,178	+		GFF2482	0.53	+0.2
65,179	-		GFF2482	0.53	+0.3
65,551	-		GFF2482	0.87	-0.1
65,580	+		GFF2482	0.90	-0.8
65,581	-		GFF2482	0.90	+1.8
65,581	-		GFF2482	0.90	-0.2
65,581	-		GFF2482	0.90	+0.1
65,581	-		GFF2482	0.90	-0.3
65,583	+				-0.3
65,584	-				-0.5
65,584	-				-0.2