Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2213

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,102,474	+		GFF2212	0.12	-0.4
1,102,474	+		GFF2212	0.12	-0.6
1,102,475	-		GFF2212	0.12	+0.6
1,102,516	+		GFF2212	0.21	+0.1
1,102,517	-		GFF2212	0.21	-0.4
1,103,099	+		GFF2213	0.19	+0.5
1,103,930	+				-2.3
1,103,930	+				+0.1
1,104,058	+				-0.2
1,104,253	+		GFF2214	0.22	+0.2
1,104,254	-		GFF2214	0.22	+1.5
1,104,517	+		GFF2214	0.45	-1.1
1,104,799	+		GFF2214	0.69	-0.2
1,104,884	-		GFF2214	0.77	-0.5