Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2156

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,046,028	+				-0.1
1,046,029	-				-0.3
1,046,029	-				+0.5
1,046,029	-				-0.4
1,046,029	-				+0.1
1,046,107	+				+0.5
1,046,141	+				+0.1
1,046,965	-				+0.1
1,046,965	-				+0.4
1,047,054	-				-0.2
1,047,066	-				+0.9
1,047,296	+		GFF2156	0.28	+0.4
1,047,404	+		GFF2156	0.37	+0.2
1,047,404	+		GFF2156	0.37	-0.1
1,047,405	-		GFF2156	0.37	+0.5
1,047,405	-		GFF2156	0.37	-0.5
1,047,405	-		GFF2156	0.37	-0.0
1,047,405	-		GFF2156	0.37	+0.1
1,047,947	+		GFF2156	0.85	+0.5
1,047,948	-		GFF2156	0.85	+0.5
1,048,404	+		GFF2157	0.18	-0.0
1,048,404	+		GFF2157	0.18	-0.0
1,048,729	-		GFF2157	0.38	+0.2
1,048,729	-		GFF2157	0.38	-0.2
1,048,893	+		GFF2157	0.49	-0.6
1,048,893	+		GFF2157	0.49	+0.2
1,048,894	-		GFF2157	0.49	+0.5
1,048,894	-		GFF2157	0.49	-0.3